The microbial rare biosphere: current concepts, methods and ecological principles

F Pascoal, R Costa, C Magalhães - FEMS Microbiology Ecology, 2021 - academic.oup.com
Our ability to describe the highly diverse pool of low abundance populations present in
natural microbial communities is increasing at an unprecedented pace. Yet we currently lack …

Major restructuring of marine plankton assemblages under global warming

F Benedetti, M Vogt, UH Elizondo, D Righetti… - Nature …, 2021 - nature.com
Marine phytoplankton and zooplankton form the basis of the ocean's food-web, yet the
impacts of climate change on their biodiversity are poorly understood. Here, we use an …

Marine DNA viral macro-and microdiversity from pole to pole

AC Gregory, AA Zayed, N Conceição-Neto… - Cell, 2019 - cell.com
Microbes drive most ecosystems and are modulated by viruses that impact their lifespan,
gene flow, and metabolic outputs. However, ecosystem-level impacts of viral community …

Global trends in marine plankton diversity across kingdoms of life

FM Ibarbalz, N Henry, MC Brandão, S Martini… - Cell, 2019 - cell.com
The ocean is home to myriad small planktonic organisms that underpin the functioning of
marine ecosystems. However, their spatial patterns of diversity and the underlying drivers …

Macroecological laws describe variation and diversity in microbial communities

J Grilli - Nature communications, 2020 - nature.com
How the coexistence of many species is maintained is a fundamental and unresolved
question in ecology. Coexistence is a puzzle because we lack a mechanistic understanding …

Many-species ecological fluctuations as a jump process from the brink of extinction

T Arnoulx de Pirey, G Bunin - Physical Review X, 2024 - APS
Highly diverse ecosystems exhibit a broad distribution of population sizes and species
turnover, where species at high and low abundances are exchanged over time. We show …

Perspectives from ten years of protist studies by high‐throughput metabarcoding

L Santoferrara, F Burki, S Filker… - Journal of Eukaryotic …, 2020 - Wiley Online Library
During the last decade, high‐throughput metabarcoding became routine for analyzing
protistan diversity and distributions in nature. Amid a multitude of exciting findings, scientists …

Stabilization of extensive fine-scale diversity by ecologically driven spatiotemporal chaos

MT Pearce, A Agarwala… - Proceedings of the …, 2020 - National Acad Sciences
It has recently become apparent that the diversity of microbial life extends far below the
species level to the finest scales of genetic differences. Remarkably, extensive fine-scale …

Refocusing the microbial rare biosphere concept through a functional lens

E Litchman, S Villéger, L Zinger, JC Auguet… - Trends in Ecology & …, 2024 - cell.com
The influential concept of the rare biosphere in microbial ecology has underscored the
importance of taxa occurring at low abundances yet potentially playing key roles in …

Selective constraints on global plankton dispersal

BA Ward, BB Cael, S Collins… - Proceedings of the …, 2021 - National Acad Sciences
Marine microbial communities are highly interconnected assemblages of organisms shaped
by ecological drift, natural selection, and dispersal. The relative strength of these forces …