From trash to treasure: detecting unexpected contamination in unmapped NGS data
Abstract Background Next Generation Sequencing (NGS) experiments produce millions of
short sequences that, mapped to a reference genome, provide biological insights at …
short sequences that, mapped to a reference genome, provide biological insights at …
The gut, vaginal, and urine microbiome in overactive bladder: a systematic review
C Sze, M Pressler, JR Lee, B Chughtai - International Urogynecology …, 2022 - Springer
Introduction and hypothesis The objective was to systemically review the current literature
on the association of gut, vaginal, and urinary dysbiosis in female patients with overactive …
on the association of gut, vaginal, and urinary dysbiosis in female patients with overactive …
Establishing the architecture of plant gene regulatory networks
Gene regulatory grids (GRGs) encompass the space of all the possible transcription factor
(TF)–target gene interactions that regulate gene expression, with gene regulatory networks …
(TF)–target gene interactions that regulate gene expression, with gene regulatory networks …
[HTML][HTML] Identification of sugar responsive transcription factors in silico
K Kokki - 2022 - helda.helsinki.fi
In order to survive, all organism require sugars, amino acids and lipids, which are used for
energy and growth. The nutritional needs of an organism vary tremendously between …
energy and growth. The nutritional needs of an organism vary tremendously between …
Design of knowledge bases for plant gene regulatory networks
E Mukundi, F Gomez-Cano, WZ Ouma… - Plant Gene Regulatory …, 2017 - Springer
Developing a knowledge base that contains all the information necessary for the researcher
studying gene regulation in a particular organism can be accomplished in four stages. This …
studying gene regulation in a particular organism can be accomplished in four stages. This …
DecontaMiner: a pipeline for the detection and analysis of contaminating sequences in human NGS sequencing data
Reads alignment is an essential step of next generation sequencing) data analyses. One
challenging issue is represented by unmapped reads that are usually discarded and …
challenging issue is represented by unmapped reads that are usually discarded and …
[PDF][PDF] Transcriptional and epigenetic regulation of differentially activated macrophages
W Krebs - 2016 - core.ac.uk
Furthermore, I want to thank all Postdocs in the Schultze group for their constant attendance
to give competent support no matter if it was day or night, especially Dr. Susanne V. Schmidt …
to give competent support no matter if it was day or night, especially Dr. Susanne V. Schmidt …
Functional analysis of the osteoarthritis susceptibility loci marked by the polymorphisms rs10492367 and rs9350591
K Johnson - 2016 - theses.ncl.ac.uk
Approximately 8.5 million people in the UK are affected by osteoarthritis (OA), a
multifactorial, polygenic disease characterised by articular cartilage loss. In 2012, the …
multifactorial, polygenic disease characterised by articular cartilage loss. In 2012, the …
[引用][C] Genetic adaptations in Microbacteriaceae species inhabiting a salinity gradient
MG Ram - 2024 - University of Auckland