On the dependency of cellular protein levels on mRNA abundance
The question of how genomic information is expressed to determine phenotypes is of central
importance for basic and translational life science research and has been studied by …
importance for basic and translational life science research and has been studied by …
A review on mass spectrometry-based quantitative proteomics: Targeted and data independent acquisition
V Vidova, Z Spacil - Analytica chimica acta, 2017 - Elsevier
Mass spectrometry (MS) based proteomics have achieved a near-complete proteome
coverage in humans and in several other organisms, producing a wealth of information …
coverage in humans and in several other organisms, producing a wealth of information …
Extending the limits of quantitative proteome profiling with data-independent acquisition and application to acetaminophen-treated three-dimensional liver …
The data-independent acquisition (DIA) approach has recently been introduced as a novel
mass spectrometric method that promises to combine the high content aspect of shotgun …
mass spectrometric method that promises to combine the high content aspect of shotgun …
A novel LC system embeds analytes in pre-formed gradients for rapid, ultra-robust proteomics
To further integrate mass spectrometry (MS)-based proteomics into biomedical research and
especially into clinical settings, high throughput and robustness are essential requirements …
especially into clinical settings, high throughput and robustness are essential requirements …
A repository of assays to quantify 10,000 human proteins by SWATH-MS
Mass spectrometry is the method of choice for deep and reliable exploration of the (human)
proteome. Targeted mass spectrometry reliably detects and quantifies pre-determined sets …
proteome. Targeted mass spectrometry reliably detects and quantifies pre-determined sets …
Quantitative variability of 342 plasma proteins in a human twin population
The degree and the origins of quantitative variability of most human plasma proteins are
largely unknown. Because the twin study design provides a natural opportunity to estimate …
largely unknown. Because the twin study design provides a natural opportunity to estimate …
Advances in targeted proteomics and applications to biomedical research
Targeted proteomics technique has emerged as a powerful protein quantification tool in
systems biology, biomedical research, and increasing for clinical applications. The most …
systems biology, biomedical research, and increasing for clinical applications. The most …
Analysis of major histocompatibility complex (MHC) immunopeptidomes using mass spectrometry
The myriad of peptides presented at the cell surface by class I and class II major
histocompatibility complex (MHC) molecules are referred to as the immunopeptidome and …
histocompatibility complex (MHC) molecules are referred to as the immunopeptidome and …
SWATH‐MS as a tool for biomarker discovery: From basic research to clinical applications
In the era of quantitative proteomics, where mass spectrometry plays a pivotal role, in
particular associated with the use of data‐independent acquisition, it is time to perform an …
particular associated with the use of data‐independent acquisition, it is time to perform an …
Using data‐independent, high‐resolution mass spectrometry in protein biomarker research: perspectives and clinical applications
In medicine, there is an urgent need for protein biomarkers in a range of applications that
includes diagnostics, disease stratification, and therapeutic decisions. One of the main …
includes diagnostics, disease stratification, and therapeutic decisions. One of the main …