Development of deep-learning-based single-molecule localization image analysis

Y Hyun, D Kim - International Journal of Molecular Sciences, 2022 - mdpi.com
Recent developments in super-resolution fluorescence microscopic techniques (SRM) have
allowed for nanoscale imaging that greatly facilitates our understanding of nanostructures …

Spectroscopic single-molecule localization microscopy: applications and prospective

B Brenner, C Sun, FM Raymo, HF Zhang - Nano convergence, 2023 - Springer
Single-molecule localization microscopy (SMLM) breaks the optical diffraction limit by
numerically localizing sparse fluorescence emitters to achieve super-resolution imaging …

Machine-learning-powered extraction of molecular diffusivity from single-molecule images for super-resolution mapping

HH Park, B Wang, S Moon, T Jepson, K Xu - Communications Biology, 2023 - nature.com
While critical to biological processes, molecular diffusion is difficult to quantify, and spatial
mapping of local diffusivity is even more challenging. Here we report a machine-learning …

Accelerating multicolor spectroscopic single-molecule localization microscopy using deep learning

S Kumar Gaire, Y Zhang, H Li, R Yu… - Biomedical Optics …, 2020 - opg.optica.org
Spectroscopic single-molecule localization microscopy (sSMLM) simultaneously provides
spatial localization and spectral information of individual single-molecules emission, offering …

Cross-modality transformations in biological microscopy enabled by deep learning

D Hassan, J Domínguez, B Midtvedt… - Advanced …, 2024 - spiedigitallibrary.org
Recent advancements in deep learning (DL) have propelled the virtual transformation of
microscopy images across optical modalities, enabling unprecedented multimodal imaging …

Multicolor single-molecule localization microscopy: review and prospect

X Chen, X Wang, F Huang, D Ma - PhotoniX, 2024 - Springer
Single-molecule localization microscopy (SMLM) surpasses the diffraction limit by randomly
switching fluorophores between fluorescent and dark states, precisely pinpointing the …

Minimizing molecular misidentification in imaging low-abundance protein interactions using spectroscopic single-molecule localization microscopy

Y Zhang, G Wang, P Huang, E Sun, J Kweon… - Analytical …, 2022 - ACS Publications
Super-resolution microscopy can capture spatiotemporal organizations of protein
interactions with resolution down to 10 nm; however, the analyses of more than two proteins …

DeepQR: single-molecule QR codes for optical gene-expression analysis

J Jeffet, B Hadad, S Froim, K Kaboub… - …, 2024 - degruyter.com
Optical imaging and single-molecule imaging, in particular, utilize fluorescent tags in order
to differentiate observed species by color. The degree of color multiplexing is dependent on …

Physically informed Monte Carlo simulation of dual-wedge prism-based spectroscopic single-molecule localization microscopy

WH Yeo, C Sun, HF Zhang - Journal of Biomedical Optics, 2024 - spiedigitallibrary.org
Significance The dual-wedge prism (DWP)-based spectroscopic single-molecule
localization microscopy (sSMLM) system offers improved localization precision and …

Artificial Intelligence‐Empowered Spectroscopic Single Molecule Localization Microscopy

Y Hyun, D Kim - Small Methods, 2024 - Wiley Online Library
Spectroscopic single‐molecule localization microscopy (SMLM) has revolutionized the
visualization and analysis of molecular structures and dynamics at the nanoscale level. The …