Extracting abundance information from DNA‐based data
The accurate extraction of species‐abundance information from DNA‐based data
(metabarcoding, metagenomics) could contribute usefully to diet analysis and food‐web …
(metabarcoding, metagenomics) could contribute usefully to diet analysis and food‐web …
[HTML][HTML] Phytoplankton composition from sPACE: Requirements, opportunities, and challenges
Ocean color satellites have provided a synoptic view of global phytoplankton for over 25
years through near surface measurements of the concentration of chlorophyll a. While …
years through near surface measurements of the concentration of chlorophyll a. While …
Ancient marine sediment DNA reveals diatom transition in Antarctica
Antarctica is one of the most vulnerable regions to climate change on Earth and studying the
past and present responses of this polar marine ecosystem to environmental change is a …
past and present responses of this polar marine ecosystem to environmental change is a …
Convergent evolution and horizontal gene transfer in Arctic Ocean microalgae
RG Dorrell, A Kuo, Z Füssy… - Life Science …, 2023 - life-science-alliance.org
Microbial communities in the world ocean are affected strongly by oceanic circulation,
creating characteristic marine biomes. The high connectivity of most of the ocean makes it …
creating characteristic marine biomes. The high connectivity of most of the ocean makes it …
Relative importance of bacterivorous mixotrophs in an estuary‐coast environment
Q Li, K Dong, Y Wang… - … and Oceanography Letters, 2024 - Wiley Online Library
Mixotrophic eukaryotes are important bacterivores in oligotrophic open oceans, but their
significance as grazers in more nutrient‐rich waters is less clear. Here, we investigated the …
significance as grazers in more nutrient‐rich waters is less clear. Here, we investigated the …
Dam construction alters planktonic microbial predator‒prey communities in the urban reaches of the Yangtze River
Q Wang, J Chen, W Qi, D Wang, H Lin, X Wu, D Wang… - Water Research, 2023 - Elsevier
While dam construction supports social and economic development, changes in hydraulic
conditions can also affect natural aquatic ecosystems, especially microbial ecosystems. The …
conditions can also affect natural aquatic ecosystems, especially microbial ecosystems. The …
Genomic and meta-genomic insights into the functions, diversity and global distribution of haptophyte algae
M Penot, JB Dacks, B Read, RG Dorrell - Applied Phycology, 2022 - Taylor & Francis
Haptophytes are an environmentally important phylum of eukaryotic phytoplankton, forming
the second most abundant algal group after diatoms in recent estimates of ocean …
the second most abundant algal group after diatoms in recent estimates of ocean …
Genetic and phenotypic intra-species diversity of alga Tisochrysis lutea reveals original genetic structure and domestication potential
G Carrier, J Berthelier, A Maupetit… - European Journal of …, 2024 - Taylor & Francis
Oceanic phytoplankton species are generally composed of many strains, with intra-species
diversity consisting of genetic and phenotypic variability. Despite its importance in ecological …
diversity consisting of genetic and phenotypic variability. Despite its importance in ecological …
A consensus protocol for the recovery of mercury methylation genes from metagenomes
Mercury (Hg) methylation genes (hgcAB) mediate the formation of the toxic methylmercury
and have been identified from diverse environments, including freshwater and marine …
and have been identified from diverse environments, including freshwater and marine …
Mock samples resolve biases in diversity estimates and quantitative interpretation of zooplankton metabarcoding data
EA Ershova, OS Wangensteen, T Falkenhaug - Marine Biodiversity, 2023 - Springer
Metabarcoding is a rapidly developing tool in marine zooplankton ecology, although most
zooplankton surveys continue to rely on visual identification for monitoring purposes. We …
zooplankton surveys continue to rely on visual identification for monitoring purposes. We …