Genomic factors shape carbon and nitrogen metabolic niche breadth across Saccharomycotina yeasts
DA Opulente, AL LaBella, MC Harrison, JF Wolters… - Science, 2024 - science.org
Organisms exhibit extensive variation in ecological niche breadth, from very narrow
(specialists) to very broad (generalists). Two general paradigms have been proposed to …
(specialists) to very broad (generalists). Two general paradigms have been proposed to …
[HTML][HTML] Mitochondrial genome diversity across the subphylum Saccharomycotina
Introduction Eukaryotic life depends on the functional elements encoded by both the nuclear
genome and organellar genomes, such as those contained within the mitochondria. The …
genome and organellar genomes, such as those contained within the mitochondria. The …
Machine learning enables identification of an alternative yeast galactose utilization pathway
MC Harrison, EJ Ubbelohde… - Proceedings of the …, 2024 - National Acad Sciences
How genomic differences contribute to phenotypic differences is a major question in biology.
The recently characterized genomes, isolation environments, and qualitative patterns of …
The recently characterized genomes, isolation environments, and qualitative patterns of …
Saccharomycotina yeasts defy long-standing macroecological patterns
KT David, MC Harrison, DA Opulente… - Proceedings of the …, 2024 - National Acad Sciences
The Saccharomycotina yeasts (“yeasts” hereafter) are a fungal clade of scientific, economic,
and medical significance. Yeasts are highly ecologically diverse, found across a broad …
and medical significance. Yeasts are highly ecologically diverse, found across a broad …
[HTML][HTML] Selected Case studies on fastidious eukaryotic microorganisms: issues and investigation strategies
The concept of fastidious microorganisms currently found in scientific literature is mainly
related to the difficulty of isolating/culturing/preserving bacteria. Eukaryotes are investigated …
related to the difficulty of isolating/culturing/preserving bacteria. Eukaryotes are investigated …
Functional and evolutionary integration of a fungal gene with a bacterial operon
Siderophores are crucial for iron-scavenging in microorganisms. While many yeasts can
uptake siderophores produced by other organisms, they are typically unable to synthesize …
uptake siderophores produced by other organisms, they are typically unable to synthesize …
The cell morphological diversity of Saccharomycotina yeasts
CM Chavez, M Groenewald, AB Hulfachor… - FEMS Yeast …, 2024 - academic.oup.com
The∼ 1 200 known species in subphylum Saccharomycotina are a highly diverse clade of
unicellular fungi. During its lifecycle, a typical yeast exhibits multiple cell types with various …
unicellular fungi. During its lifecycle, a typical yeast exhibits multiple cell types with various …
Production of single cell protein rich in potassium by Nectaromyces rattus using biogas slurry and molasses
Y Yi, J Li, P Zhou, F Jia, Y Chen, D Li - Journal of Environmental …, 2024 - Elsevier
Single-cell protein (SCP) is a vital supplement for animal protein feed. This study utilized
biogas slurry and sugarcane molasses to ferment Nectaromyces rattus for the production of …
biogas slurry and sugarcane molasses to ferment Nectaromyces rattus for the production of …
Phylogenomics reveals extensive misidentification of fungal strains from the genus Aspergillus
JL Steenwyk, C Balamurugan, HA Raja… - Microbiology …, 2024 - Am Soc Microbiol
Modern taxonomic classification is often based on phylogenetic analyses of a few molecular
markers, although single-gene studies are still common. Here, we leverage genome-scale …
markers, although single-gene studies are still common. Here, we leverage genome-scale …
[HTML][HTML] Oxygenation influences xylose fermentation and gene expression in the yeast genera Spathaspora and Scheffersomyces
Background Cost-effective production of biofuels from lignocellulose requires the
fermentation of d-xylose. Many yeast species within and closely related to the genera …
fermentation of d-xylose. Many yeast species within and closely related to the genera …