Microbial circadian clocks: host-microbe interplay in diel cycles

EM Wollmuth, ER Angert - BMC microbiology, 2023 - Springer
Background Circadian rhythms, observed across all domains of life, enable organisms to
anticipate and prepare for diel changes in environmental conditions. In bacteria, a circadian …

Genomic characterization of three novel Desulfobacterota classes expand the metabolic and phylogenetic diversity of the phylum

CL Murphy, J Biggerstaff, A Eichhorn… - Environmental …, 2021 - Wiley Online Library
We report on the genomic characterization of three novel classes in the phylum
Desulfobacterota. One class (proposed name Candidatus 'Anaeroferrophillalia') was …

Updated virophage taxonomy and distinction from polinton-like viruses

S Roux, MG Fischer, T Hackl, LA Katz, F Schulz… - Biomolecules, 2023 - mdpi.com
Virophages are small dsDNA viruses that hijack the machinery of giant viruses during the co-
infection of a protist (ie, microeukaryotic) host and represent an exceptional case of …

Pangenomics reveals alternative environmental lifestyles among chlamydiae

S Köstlbacher, A Collingro, T Halter, F Schulz… - Nature …, 2021 - nature.com
Chlamydiae are highly successful strictly intracellular bacteria associated with diverse
eukaryotic hosts. Here we analyzed metagenome-assembled genomes of the “Genomes …

Genomic insights into cryptic cycles of microbial hydrocarbon production and degradation in contiguous freshwater and marine microbiomes

A Vigneron, P Cruaud, C Lovejoy, WF Vincent - Microbiome, 2023 - Springer
Background Cyanobacteria and eukaryotic phytoplankton produce long-chain alkanes and
generate around 100 times greater quantities of hydrocarbons in the ocean compared to …

Variable impact of geochemical gradients on the functional potential of bacteria, archaea, and phages from the permanently stratified Lac Pavin

AL Jaffe, C Bardot, AH Le Jeune, J Liu, J Colombet… - Microbiome, 2023 - Springer
Background Permanently stratified lakes contain diverse microbial communities that vary
with depth and so serve as useful models for studying the relationships between microbial …

The Expanding Diversity of Viruses from Extreme Environments

RD Manuel, JC Snyder - International Journal of Molecular Sciences, 2024 - mdpi.com
Viruses are nonliving biological entities whose host range encompasses all known forms of
life. They are deceptively simple in description (a protein shell surrounding genetic material …

Microbial communities of stratified aquatic ecosystems of Kandalaksha Bay (White Sea) shed light on the evolutionary history of green and brown morphotypes of …

D Grouzdev, V Gaisin, O Lunina… - FEMS Microbiology …, 2022 - academic.oup.com
Anoxygenic photoautotrophic metabolism of green sulfur bacteria of the family
Chlorobiaceae played a significant role in establishing the Earth's biosphere. Two known …

New chemical and microbial perspectives on vitamin B1 and vitamer dynamics of a coastal system

MJ Bittner, CC Bannon, E Rowland… - ISME …, 2024 - academic.oup.com
Abstract Vitamin B1 (thiamin, B1) is an essential micronutrient for cells, yet intriguingly in
aquatic systems most bacterioplankton are unable to synthesize it de novo (auxotrophy) …

Novel endolithic bacteria of phylum Chloroflexota reveal a myriad of potential survival strategies in the Antarctic desert

TJ Williams, MA Allen, AE Ray, N Benaud… - Applied and …, 2024 - Am Soc Microbiol
ABSTRACT The ice-free McMurdo Dry Valleys of Antarctica are dominated by nutrient-poor
mineral soil and rocky outcrops. The principal habitat for microorganisms is within rocks …