Regulation of ribosomal RNA gene copy number, transcription and nucleolus organization in eukaryotes

Y Hori, C Engel, T Kobayashi - Nature reviews Molecular cell biology, 2023 - nature.com
One of the first biological machineries to be created seems to have been the ribosome.
Since then, organisms have dedicated great efforts to optimize this apparatus. The …

Epigenetics and aging

S Pal, JK Tyler - Science advances, 2016 - science.org
Over the past decade, a growing number of studies have revealed that progressive changes
to epigenetic information accompany aging in both dividing and nondividing cells …

Epigenetic changes during aging and their reprogramming potential

AE Kane, DA Sinclair - Critical reviews in biochemistry and …, 2019 - Taylor & Francis
The aging process results in significant epigenetic changes at all levels of chromatin and
DNA organization. These include reduced global heterochromatin, nucleosome remodeling …

[HTML][HTML] Nucleolar organizer regions: genomic 'dark matter'requiring illumination

B McStay - Genes & development, 2016 - genesdev.cshlp.org
Nucleoli form around tandem arrays of a ribosomal gene repeat, termed nucleolar organizer
regions (NORs). During metaphase, active NORs adopt a characteristic undercondensed …

Engineering longevity—design of a synthetic gene oscillator to slow cellular aging

Z Zhou, Y Liu, Y Feng, S Klepin, LS Tsimring, L Pillus… - Science, 2023 - science.org
Synthetic biology enables the design of gene networks to confer specific biological
functions, yet it remains a challenge to rationally engineer a biological trait as complex as …

A programmable fate decision landscape underlies single-cell aging in yeast

Y Li, Y Jiang, J Paxman, R O'Laughlin, S Klepin, Y Zhu… - Science, 2020 - science.org
Chromatin instability and mitochondrial decline are conserved processes that contribute to
cellular aging. Although both processes have been explored individually in the context of …

Budding yeast as a model organism to study the effects of age

A Denoth Lippuner, T Julou… - FEMS microbiology …, 2014 - academic.oup.com
Although a budding yeast culture can be propagated eternally, individual yeast cells age
and eventually die. The detailed knowledge of this unicellular eukaryotic species as well as …

The human ribosomal DNA array is composed of highly homogenized tandem clusters

Y Hori, A Shimamoto, T Kobayashi - Genome research, 2021 - genome.cshlp.org
The structure of the human ribosomal DNA (rDNA) cluster has traditionally been hard to
analyze owing to its highly repetitive nature. However, the recent development of long-read …

Genomic instability and epigenetic changes during aging

L López-Gil, A Pascual-Ahuir, M Proft - International Journal of Molecular …, 2023 - mdpi.com
Aging is considered the deterioration of physiological functions along with an increased
mortality rate. This scientific review focuses on the central importance of genomic instability …

rDNA array length is a major determinant of replicative lifespan in budding yeast

M Hotz, NH Thayer, DG Hendrickson… - Proceedings of the …, 2022 - National Acad Sciences
The complex processes and interactions that regulate aging and determine lifespan are not
fully defined for any organism. Here, taking advantage of recent technological advances in …