[HTML][HTML] Applications of machine learning in human microbiome studies: a review on feature selection, biomarker identification, disease prediction and treatment

LJ Marcos-Zambrano… - Frontiers in …, 2021 - frontiersin.org
The number of microbiome-related studies has notably increased the availability of data on
human microbiome composition and function. These studies provide the essential material …

[HTML][HTML] Radiotherapy and the gut microbiome: facts and fiction

J Liu, C Liu, J Yue - Radiation Oncology, 2021 - Springer
An ever-growing body of evidence has linked the gut microbiome with both the effectiveness
and the toxicity of cancer therapies. Radiotherapy is an effective way to treat tumors …

[HTML][HTML] Gut microbiota-mediated nucleotide synthesis attenuates the response to neoadjuvant chemoradiotherapy in rectal cancer

H Teng, Y Wang, X Sui, J Fan, S Li, X Lei, C Shi, W Sun… - Cancer Cell, 2023 - cell.com
Preoperative neoadjuvant chemoradiotherapy (nCRT) is a standard treatment for locally
advanced rectal cancer (LARC) patients, yet little is known about the mediators underlying …

Gut microbiome components predict response to neoadjuvant chemoradiotherapy in patients with locally advanced rectal cancer: a prospective, longitudinal study

Y Yi, L Shen, W Shi, F Xia, H Zhang, Y Wang… - clinical cancer …, 2021 - AACR
Purpose: The gut microbiome is involved in antitumor immunotherapy and chemotherapy
responses; however, evidence-based research on the role of gut microbiome in predicting …

Role of the microbiota in response to and recovery from cancer therapy

SJ Blake, Y Wolf, B Boursi, DJ Lynn - Nature Reviews Immunology, 2024 - nature.com
Our understanding of how the microbiota affects the balance between response to and
failure of cancer treatment by modulating the tumour microenvironment and systemic …

[HTML][HTML] Machine learning approaches in microbiome research: challenges and best practices

G Papoutsoglou, S Tarazona, MB Lopes… - Frontiers in …, 2023 - frontiersin.org
Microbiome data predictive analysis within a machine learning (ML) workflow presents
numerous domain-specific challenges involving preprocessing, feature selection, predictive …

Predicting response to neoadjuvant chemoradiotherapy in rectal cancer: from biomarkers to tumor models

M Li, Q Xiao, N Venkatachalam… - Therapeutic …, 2022 - journals.sagepub.com
Colorectal cancer (CRC) is a major contributor to cancer-associated morbidity worldwide
and over one-third of CRC is located in the rectum. Neoadjuvant chemoradiotherapy (nCRT) …

[HTML][HTML] The gut microbiome is associated with therapeutic responses and toxicities of neoadjuvant chemoradiotherapy in rectal cancer patients—a pilot study

W Shi, L Shen, W Zou, J Wang, J Yang… - Frontiers in cellular …, 2020 - frontiersin.org
Responses to neoadjuvant chemoradiotherapy (nCRT) and therapy-related toxicities in
rectal cancer vary among patients. To provide the individualized therapeutic option for each …

[HTML][HTML] Gut Microbiota as Potential Biomarker and/or Therapeutic Target to Improve the Management of Cancer: Focus on Colibactin-Producing Escherichia coli in …

J Veziant, R Villéger, N Barnich, M Bonnet - Cancers, 2021 - mdpi.com
Simple Summary Gut microbiota is emerging as new diagnostic and prognostic marker
and/or therapeutic target to improve the management of cancer. This review aims to …

[HTML][HTML] Patient derived organoids confirm that PI3K/AKT signalling is an escape pathway for radioresistance and a target for therapy in rectal cancer

K Wanigasooriya, JD Barros-Silva, L Tee… - Frontiers in …, 2022 - frontiersin.org
Objectives Partial or total resistance to preoperative chemoradiotherapy occurs in more than
half of locally advanced rectal cancer patients. Several novel or repurposed drugs have …