Circadian rhythms of hydraulic conductance and growth are enhanced by drought and improve plant performance

CF Caldeira, L Jeanguenin, F Chaumont… - Nature …, 2014 - nature.com
Circadian rhythms enable plants to anticipate daily environmental variations, resulting in
growth oscillations under continuous light. Because plants daily transpire up to 200% of their …

The singularity response reveals entrainment properties of the plant circadian clock

K Masuda, IT Tokuda, N Nakamichi… - Nature Communications, 2021 - nature.com
Circadian clocks allow organisms to synchronize their physiological processes to diurnal
variations. A phase response curve allows researchers to understand clock entrainment by …

Nondestructive and intuitive determination of circadian chlorophyll rhythms in soybean leaves using multispectral imaging

WJ Pan, X Wang, YR Deng, JH Li, W Chen… - Scientific Reports, 2015 - nature.com
The circadian clock, synchronized by daily cyclic environmental cues, regulates diverse
aspects of plant growth and development and increases plant fitness. Even though much is …

An extended Hilbert transform method for reconstructing the phase from an oscillatory signal

A Matsuki, H Kori, R Kobayashi - Scientific Reports, 2023 - nature.com
Rhythmic activity is ubiquitous in biological systems from the cellular to organism level.
Reconstructing the instantaneous phase is the first step in analyzing the essential …

Circadian oscillation of the lettuce transcriptome under constant light and light–dark conditions

T Higashi, K Aoki, AJ Nagano, MN Honjo… - Frontiers in Plant …, 2016 - frontiersin.org
Although, the circadian clock is a universal biological system in plants and it orchestrates
important role of plant production such as photosynthesis, floral induction and growth, there …

Detection of diurnal variation of tomato transcriptome through the molecular timetable method in a sunlight-type plant factory

T Higashi, Y Tanigaki, K Takayama… - Frontiers in Plant …, 2016 - frontiersin.org
The timing of measurement during plant growth is important because many genes are
expressed periodically and orchestrate physiological events. Their periodicity is generated …

Optimal synchronization of oscillatory chemical reactions with complex pulse, square, and smooth waveforms signals maximizes Tsallis entropy

HA Tanaka, I Nishikawa, J Kurths, Y Chen… - Europhysics …, 2015 - iopscience.iop.org
We show that the mathematical structure of Tsallis entropy underlies an important and
ubiquitous problem in nonlinear science related to an efficient synchronization of weakly …

Restoring circadian gene profiles in clock networks using synthetic feedback control

M Foo, OE Akman, DG Bates - NPJ systems biology and applications, 2022 - nature.com
The circadian system—an organism's built-in biological clock—is responsible for
orchestrating biological processes to adapt to diurnal and seasonal variations. Perturbations …

An extended mathematical model for reproducing the phase response of Arabidopsis thaliana under various light conditions

T Ohara, H Fukuda, IT Tokuda - Journal of theoretical biology, 2015 - Elsevier
Experimental studies showed that light qualities such as color and strength influence the
phase response properties of plant circadian systems. These effects, however, have yet to …

Multicellularity enriches the entrainment of Arabidopsis circadian clock

K Masuda, R Kitaoka, K Ukai, IT Tokuda, H Fukuda - Science Advances, 2017 - science.org
The phase response curve (PRC) of the circadian clock provides one of the most significant
indices for anticipating entrainment of outer cycles, despite the difficulty of making precise …