Fragment‐based drug discovery—the importance of high‐quality molecule libraries

M Bon, A Bilsland, J Bower, K McAulay - Molecular Oncology, 2022 - Wiley Online Library
Fragment‐based drug discovery (FBDD) is now established as a complementary approach
to high‐throughput screening (HTS). Contrary to HTS, where large libraries of drug‐like …

ChemTSv2: Functional molecular design using de novo molecule generator

S Ishida, T Aasawat, M Sumita… - Wiley …, 2023 - Wiley Online Library
Designing functional molecules is the prerogative of experts who have advanced knowledge
and experience in their fields. To democratize automatic molecular design for both experts …

Improving de novo molecular design with curriculum learning

J Guo, V Fialková, JD Arango, C Margreitter… - Nature Machine …, 2022 - nature.com
Reinforcement learning is a powerful paradigm that has gained popularity across multiple
domains. However, applying reinforcement learning may come at the cost of multiple …

DockStream: a docking wrapper to enhance de novo molecular design

J Guo, JP Janet, MR Bauer, E Nittinger… - Journal of …, 2021 - Springer
Recently, we have released the de novo design platform REINVENT in version 2.0. This
improved and extended iteration supports far more features and scoring function …

Artificial intelligence and cheminformatics tools: a contribution to the drug development and chemical science

I Saifi, BA Bhat, SS Hamdani, UY Bhat… - Journal of …, 2024 - Taylor & Francis
In the ever-evolving field of drug discovery, the integration of Artificial Intelligence (AI) and
Machine Learning (ML) with cheminformatics has proven to be a powerful combination …

AlphaDrug: protein target specific de novo molecular generation

H Qian, C Lin, D Zhao, S Tu, L Xu - PNAS nexus, 2022 - academic.oup.com
Traditional drug discovery is very laborious, expensive, and time-consuming, due to the
huge combinatorial complexity of the discrete molecular search space. Researchers have …

Augmented Hill-Climb increases reinforcement learning efficiency for language-based de novo molecule generation

M Thomas, NM O'Boyle, A Bender… - Journal of …, 2022 - Springer
A plethora of AI-based techniques now exists to conduct de novo molecule generation that
can devise molecules conditioned towards a particular endpoint in the context of drug …

PETrans: De novo drug design with protein-specific encoding based on transfer learning

X Wang, C Gao, P Han, X Li, W Chen… - International Journal of …, 2023 - mdpi.com
Recent years have seen tremendous success in the design of novel drug molecules through
deep generative models. Nevertheless, existing methods only generate drug-like molecules …

Insights into the luminescence quantum yields of cyclometalated iridium (iii) complexes: A density functional theory and machine learning approach

M Hatanaka, H Kato, M Sakai, K Kariya… - The Journal of …, 2023 - ACS Publications
Cyclometalated iridium (III) complexes have been used in various optical materials,
including organic light-emitting diodes (OLEDs) and photocatalysts, and a deeper …

Recent advances in automated structure-based de novo drug design

Y Tang, R Moretti, J Meiler - Journal of Chemical Information and …, 2024 - ACS Publications
As the number of determined and predicted protein structures and the size of druglike 'make-
on-demand'libraries soar, the time-consuming nature of structure-based computer-aided …