Updated classification of norovirus genogroups and genotypes

P Chhabra, M de Graaf, GI Parra… - Journal of General …, 2019 - microbiologyresearch.org
Noroviruses are genetically diverse RNA viruses associated with acute gastroenteritis in
mammalian hosts. Phylogenetically, they can be segregated into different genogroups as …

High throughput sequencing for the detection and characterization of RNA viruses

AH Fitzpatrick, A Rupnik, H O'Shea, F Crispie… - Frontiers in …, 2021 - frontiersin.org
This review aims to assess and recommend approaches for targeted and agnostic High
Throughput Sequencing of RNA viruses in a variety of sample matrices. HTS also referred to …

Molecular and Genetics-Based Systems for Tracing the Evolution and Exploring the Mechanisms of Human Norovirus Infections

SC Lin, GH Bai, PC Lin, CY Chen, YH Hsu… - International journal of …, 2023 - mdpi.com
Human noroviruses (HuNoV) are major causes of acute gastroenteritis around the world.
The high mutation rate and recombination potential of noroviruses are significant challenges …

Detection and sequencing of multiple human norovirus genotypes from imported frozen raspberries linked to outbreaks in the province of Quebec, Canada, in 2017

P Raymond, S Paul, A Perron, C Bellehumeur… - Food and Environmental …, 2022 - Springer
Human noroviruses are among the main causes of acute gastroenteritis worldwide. Frozen
raspberries have been linked to several norovirus food-related outbreaks. However, the …

Genetic characterization of norovirus GII. 4 variants circulating in Canada using a metagenomic technique

N Petronella, J Ronholm, M Suresh, J Harlow… - BMC Infectious …, 2018 - Springer
Background Human norovirus is the leading cause of viral gastroenteritis globally, and the
GII. 4 has been the most predominant genotype for decades. This genotype has numerous …

Novel opportunities for NGS-based one health surveillance of foodborne viruses

M Desdouits, M de Graaf, S Strubbia… - One Health …, 2020 - Springer
Foodborne viral infections rank among the top 5 causes of disease, with noroviruses and
hepatitis A causing the greatest burden globally. Contamination of foods by infected food …

Metagenomics to detect and characterize viruses in food samples at genome level? Lessons learnt from a norovirus study

FE Buytaers, B Verhaegen, M Gand, J D'aes… - Foods, 2022 - mdpi.com
In this proof-of-concept study on food contaminated with norovirus, we investigated the
feasibility of metagenomics as a new method to obtain the whole genome sequence of the …

[HTML][HTML] Co-circulation of multiple subtypes of enterovirus A71 (EV-A71) genotype C, including novel recombinants characterised by use of whole genome sequencing …

SE Midgley, AG Nielsen, R Trebbien… - …, 2017 - eurosurveillance.org
In Europe, enterovirus A71 (EV-A71) has primarily been associated with sporadic cases of
neurological disease. The recent emergence of new genotypes and larger outbreaks with …

Using molecular methods to delineate norovirus outbreaks: a systematic review

L Tao, X Zhang, X Wang, J Ding - Archives of Virology, 2024 - Springer
Noroviruses are among the major causative agents of human acute gastroenteritis, and the
nature of norovirus outbreaks can differ considerably. The number of single-nucleotide …

Molecular epidemiology of human adenovirus infections in Denmark, 2011–2016

C Barnadas, DJ Schmidt, TK Fischer… - Journal of Clinical …, 2018 - Elsevier
Abstract Background Human adenoviruses (HAdVs) can cause respiratory tract infections,
conjunctivitis, diarrhoea and outbreaks have been reported. However, little is known about …