Computational methods for the analysis and prediction of egfr-mutated lung cancer drug resistance: Recent advances in drug design, challenges and future prospects

R Qureshi, B Zou, T Alam, J Wu… - … /ACM Transactions on …, 2022 - ieeexplore.ieee.org
Lung cancer is a major cause of cancer deaths worldwide, and has a very low survival rate.
Non-small cell lung cancer (NSCLC) is the largest subset of lung cancers, which accounts …

[HTML][HTML] Designing of Complex Multi-epitope Peptide Vaccine Based on Omps of Klebsiella pneumoniae: An In Silico Approach

T Farhadi, N Nezafat, Y Ghasemi, Z Karimi… - International Journal of …, 2015 - Springer
Klebsiella pneumoniae is a hospital-acquired pathogen that leads to various infections.
There is a great interest in developing an efficient Klebsiella vaccine and epitope-based …

[HTML][HTML] Structural modeling and in silico analysis of non-synonymous single nucleotide polymorphisms of human 3β-hydroxysteroid dehydrogenase type 2

AM Goswami - Meta gene, 2015 - Elsevier
Abstract Single-nucleotide polymorphisms (SNPs), a most common type of genetic
mutations, result from single base pair alterations. Non-synonymous SNPs (nsSNP) occur in …

Sesquiterpenoids isolated from davana (Artemisia pallens Wall. ex DC) mitigates parkinsonism in Caenorhabditis elegans disease model

M Trivedi, S Singh, T Pandey, SK Gupta… - Biochemical and …, 2022 - Elsevier
Parkinson's disease (PD) is a multifactorial ailment that severely affects the viability of
dopaminergic neurons leading to progressive loss of motor control. The current regimen for …

Enhanced stability of manganese superoxide dismutase by amino acid replacement designed via molecular dynamics simulation

J Liu, B Wei, C Che, Z Gong, Y Jiang, M Si… - International journal of …, 2019 - Elsevier
In order to improve manganese-SOD stability, three mutations were constructed via site-
directed mutagenesis, and the root mean square fluctuation (RMSF) and root mean square …

[HTML][HTML] Understanding the Mechanism of Atovaquone Drug Resistance in Plasmodium falciparum Cytochrome b Mutation Y268S Using Computational Methods

BA Akhoon, KP Singh, M Varshney, SK Gupta… - PLoS …, 2014 - journals.plos.org
The rapid appearance of resistant malarial parasites after introduction of atovaquone (ATQ)
drug has prompted the search for new drugs as even single point mutations in the active site …

[HTML][HTML] Molecular Characterization and Expression of Four Aquaporin Genes in Impatiens walleriana during Drought Stress and Recovery

MJ Đurić, AR Subotić, LT Prokić… - Plants, 2021 - mdpi.com
Aquaporins comprise a large group of transmembrane proteins responsible for water
transport, which is crucial for plant survival under stress conditions. Despite the vital role of …

The functional impact of the C/N-terminal extensions of the mouse retinal IMPDH1 isoforms: a kinetic evaluation

B Andashti, R Yazdanparast, E Barzegari… - Molecular and cellular …, 2020 - Springer
Mutations in the retinal inosine monophosphate dehydrogenase1 (IMPDH1) gene is
believed to be one cause of retinitis pigmentosa (RP). The main structural difference …

In silico designing of some agonists of toll-like receptor 5 as a novel vaccine adjuvant candidates

T Farhadi, RS Ovchinnikov, MM Ranjbar - Network Modeling Analysis in …, 2016 - Springer
Infectious diseases are an important cause of fatality worldwide and administration of
vaccines could provide long-lasting protection against responsible infection. Incorporating of …

Constructing novel chimeric DNA vaccine against Salmonella enterica based on SopB and GroEL proteins: an in silico approach

T Farhadi, SMR Hashemian - Journal of Pharmaceutical Investigation, 2018 - Springer
Salmonella enterica is an important enteric pathogen that causes intestinal and systemic
infections in warm-blooded animals. Due to different problems caused by administration of …