Fitness costs of plasmids: a limit to plasmid transmission

A San Millan, RC MacLean - Microbiology spectrum, 2017 - Am Soc Microbiol
Plasmids mediate the horizontal transmission of genetic information between bacteria,
facilitating their adaptation to multiple environmental conditions. An especially important …

Translation elongation and recoding in eukaryotes

TE Dever, JD Dinman, R Green - Cold Spring Harbor …, 2018 - cshperspectives.cshlp.org
In this review, we highlight the current understanding of translation elongation and recoding
in eukaryotes. In addition to providing an overview of the process, recent advances in our …

Design, synthesis, and testing toward a 57-codon genome

N Ostrov, M Landon, M Guell, G Kuznetsov, J Teramoto… - Science, 2016 - science.org
Recoding—the repurposing of genetic codons—is a powerful strategy for enhancing
genomes with functions not commonly found in nature. Here, we report computational …

An integrated, structure-and energy-based view of the genetic code

H Grosjean, E Westhof - Nucleic acids research, 2016 - academic.oup.com
The principles of mRNA decoding are conserved among all extant life forms. We present an
integrative view of all the interaction networks between mRNA, tRNA and rRNA: the intrinsic …

What is code biology?

M Barbieri - Biosystems, 2018 - Elsevier
Various independent discoveries have shown that many organic codes exist in living
systems, and this implies that they came into being during the history of life and contributed …

Biocatalysis with unnatural amino acids: enzymology meets xenobiology

F Agostini, JS Völler, B Koksch… - Angewandte Chemie …, 2017 - Wiley Online Library
The goal of xenobiology is to design biological systems endowed with unusual biochemical
functions, whereas enzymology concerns the study of enzymes, the workhorses of …

Origin and evolution of the universal genetic code

EV Koonin, AS Novozhilov - Annual review of genetics, 2017 - annualreviews.org
The standard genetic code (SGC) is virtually universal among extant life forms. Although
many deviations from the universal code exist, particularly in organelles and prokaryotes …

Transfer RNAs: diversity in form and function

MD Berg, CJ Brandl - RNA biology, 2021 - Taylor & Francis
As the adaptor that decodes mRNA sequence into protein, the basic aspects of tRNA
structure and function are central to all studies of biology. Yet the complexities of their …

Rewriting the genetic code

T Mukai, MJ Lajoie, M Englert… - Annual review of …, 2017 - annualreviews.org
The genetic code—the language used by cells to translate their genomes into proteins that
perform many cellular functions—is highly conserved throughout natural life. Rewriting the …

Mechanisms of protein evolution

V Jayaraman, S Toledo‐Patiño, L Noda‐García… - Protein …, 2022 - Wiley Online Library
How do proteins evolve? How do changes in sequence mediate changes in protein
structure, and in turn in function? This question has multiple angles, ranging from …