Efficient and versatile application of fluorescence DNA-conjugated CdTe quantum dots nanoprobe for detection of a specific target DNA of SARS Cov-2 virus

GR Bardajee, M Zamani, M Sharifi - Langmuir, 2021 - ACS Publications
Regarding the outbreak of the SARS Cov-2 virus pandemic worldwide, it seems necessary
to provide new diagnostic methods to combat the virus. A fluorescence CdTe quantum dots …

An experimental comparison between primer and nucleotide labelling to produce RPA-amplicons used for multiplex detection of antibiotic resistance genes

C Warmt, LM Broweleit, CK Fenzel, J Henkel - Scientific Reports, 2023 - nature.com
Direct labelling of amplification products using isothermal amplification is currently done
most frequently by incorporating previously labelled primer. Although this method is well …

Using Cy5-dUTP labelling of RPA-amplicons with downstream microarray analysis for the detection of antibiotic resistance genes

C Warmt, CK Fenzel, J Henkel, FF Bier - Scientific Reports, 2021 - nature.com
In this report we describe Cy5-dUTP labelling of recombinase-polymerase-amplification
(RPA) products directly during the amplification process for the first time. Nucleic acid …

Multiplex detection and identification of viral, bacterial, and protozoan pathogens in human blood and plasma using an expanded high-density resequencing …

M Kourout, S Espich, C Fisher, I Tiper… - Frontiers in Molecular …, 2024 - frontiersin.org
Introduction: Nucleic acid tests for blood donor screening have improved the safety of the
blood supply; however, increasing numbers of emerging pathogen tests are burdensome …

Application of whole‐genome tiling array at Shanghai port, China: An alternative method for SARS‐CoV‐2 surveillance

D Liu, Z Wang, M Mao, Z Zhang, X Ding… - Journal of Medical …, 2023 - Wiley Online Library
The ongoing coronavirus disease 2019 (COVID‐19) pandemic, driven by the severe acute
respiratory syndrome coronavirus 2 (SARS‐CoV‐2), highlights the critical role of genomic …

SARS-CoV-2 variant identification using a genome tiling array and genotyping probes

R Shimada, EN Alden, K Hoff, X Ding, J Sun… - Personalized …, 2023 - Taylor & Francis
With over 5.5 million deaths worldwide attributed to the respiratory disease COVID-19
caused by the novel coronavirus SARS-CoV-2, it is essential that continued efforts be made …

Spatial Transcriptomics Sequencing of Mouse Liver at 2µm Resolution Using a Novel Spatial DNA Chip

X Ding, K Hoff, R Swaminathan, M Koutrouli, S Pollom… - bioRxiv, 2024 - biorxiv.org
Spatial transcriptomics enables analysis of gene expression that is spatially resolved within
a tissue section, making it possible to elucidate the relationship between individual cells …

A full genome tiling array enhanced the inspection and quarantine of SARS-CoV-2

R Qi, G Wang, X Wang, C Li, L Huang, W Xiao, B Shao… - Virology Journal, 2023 - Springer
As the worldwide spreading epidemic of SARS-CoV-2, quick inspection and quarantine of
passengers for SARS-CoV-2 infection are essential for controlling the spread of SARS-CoV …

Labelling of RPA amplicons: an experimental comparison between primer and nucleotide labelling used for multiplex detection of antibiotic resistance genes

C Warmt, LM Broweleit, CK Fenzel, J Henkel - 2023 - researchsquare.com
Direct labelling of amplification products using isothermal amplification is currently done
most frequently by incorporating previously labelled primer. Although this method is well …

Viral Genome Surveillance via Modifiable Microarray Sequencing and a Supervised Stack Ensemble Neural Network Model: SARS-CoV-2 as a Case Study

K Plackowski, I Ebinumoliseh, E Ogbuewu, K Hoff… - 2024 - researchsquare.com
Background Viral outbreaks, including Dengue, Zika, Ebola, and particularly SARS-CoV-2,
have caused significant global impacts and unprecedented losses of life. SARS-CoV-2, in …