Forest microbiome: diversity, complexity and dynamics

P Baldrian - FEMS Microbiology reviews, 2017 - academic.oup.com
Globally, forests represent highly productive ecosystems that act as carbon sinks where soil
organic matter is formed from residuals after biomass decomposition as well as from …

Dimensions of biodiversity in the Earth mycobiome

KG Peay, PG Kennedy, JM Talbot - Nature Reviews Microbiology, 2016 - nature.com
Fungi represent a large proportion of the genetic diversity on Earth and fungal activity
influences the structure of plant and animal communities, as well as rates of ecosystem …

A few Ascomycota taxa dominate soil fungal communities worldwide

E Egidi, M Delgado-Baquerizo, JM Plett, J Wang… - Nature …, 2019 - nature.com
Despite having key functions in terrestrial ecosystems, information on the dominant soil fungi
and their ecological preferences at the global scale is lacking. To fill this knowledge gap, we …

FUNGuild: an open annotation tool for parsing fungal community datasets by ecological guild

NH Nguyen, Z Song, ST Bates, S Branco, L Tedersoo… - Fungal ecology, 2016 - Elsevier
Fungi typically live in highly diverse communities composed of multiple ecological guilds.
Although high-throughput sequencing has greatly increased the ability to quantify the …

What are mycorrhizal traits?

VB Chaudhary, EP Holland… - Trends in ecology & …, 2022 - cell.com
Traits are inherent properties of organisms, but how are they defined for organismal
networks such as mycorrhizal symbioses? Mycorrhizal symbioses are complex and diverse …

Dispersal in microbes: fungi in indoor air are dominated by outdoor air and show dispersal limitation at short distances

RI Adams, M Miletto, JW Taylor, TD Bruns - The ISME journal, 2013 - academic.oup.com
The indoor microbiome is a complex system that is thought to depend on dispersal from the
outdoor biome and the occupants' microbiome combined with selective pressures imposed …

Sequence depth, not PCR replication, improves ecological inference from next generation DNA sequencing

DP Smith, KG Peay - PloS one, 2014 - journals.plos.org
Recent advances in molecular approaches and DNA sequencing have greatly progressed
the field of ecology and allowed for the study of complex communities in unprecedented …

Continental-scale distributions of dust-associated bacteria and fungi

A Barberán, J Ladau, JW Leff… - Proceedings of the …, 2015 - National Acad Sciences
It has been known for centuries that microorganisms are ubiquitous in the atmosphere,
where they are capable of long-distance dispersal. Likewise, it is well-established that these …

How does forest management affect fungal diversity and community composition? Current knowledge and future perspectives for the conservation of forest fungi

A Tomao, JA Bonet, C Castano, S de-Miguel - Forest Ecology and …, 2020 - Elsevier
The influence of forest management on fungal diversity and community composition has
been the subject of a wide number of studies over the last two decades. However, the …

Effects of dispersal and selection on stochastic assembly in microbial communities

S Evans, JBH Martiny, SD Allison - The ISME journal, 2017 - academic.oup.com
Stochastic processes can play an important role in microbial community assembly. Dispersal
limitation is one process that can increase stochasticity and obscure relationships between …