Comparing RADseq and microsatellites for estimating genetic diversity and relatedness—Implications for brown trout conservation

A Lemopoulos, JM Prokkola… - Ecology and …, 2019 - Wiley Online Library
The conservation and management of endangered species requires information on their
genetic diversity, relatedness and population structure. The main genetic markers applied …

Comparing the Performance of Microsatellites and RADseq in Population Genetic Studies: Analysis of Data for Pike (Esox lucius) and a Synthesis of Previous Studies

J Sunde, Y Yıldırım, P Tibblin, A Forsman - Frontiers in genetics, 2020 - frontiersin.org
Population genetic studies reveal biodiversity patterns and inform about drivers of
evolutionary differentiation and adaptation, including gene flow, drift and selection. This can …

Conservation and management of salmon in the age of genomics

RS Waples, KA Naish… - Annual Review of Animal …, 2020 - annualreviews.org
Salmon were among the first nonmodel species for which systematic population genetic
studies of natural populations were conducted, often to support management and …

The future is now: Amplicon sequencing and sequence capture usher in the conservation genomics era

MH Meek, WA Larson - 2019 - Wiley Online Library
The genomics revolution has initiated a new era of population genetics where genome‐wide
data are frequently used to understand complex patterns of population structure and …

Salmon lice-induced mortality of Atlantic salmon during post-smolt migration in Norway

IA Johnsen, A Harvey, PN Sævik… - ICES journal of …, 2021 - academic.oup.com
The expansion of salmonid aquaculture has resulted in environmental challenges, including
salmon lice that may infest both farmed and wild fish. For wild Atlantic salmon post-smolts …

Big data in conservation genomics: Boosting skills, hedging bets, and staying current in the field

RM Schweizer, N Saarman, KM Ramstad… - Journal of …, 2021 - academic.oup.com
A current challenge in the fields of evolutionary, ecological, and conservation genomics is
balancing production of large-scale datasets with additional training often required to handle …

Multifaceted framework for defining conservation units: An example from Atlantic salmon (Salmo salar) in Canada

SJ Lehnert, IR Bradbury, BF Wringe… - Evolutionary …, 2023 - Wiley Online Library
Conservation units represent important components of intraspecific diversity that can aid in
prioritizing and protecting at‐risk populations, while also safeguarding unique diversity that …

The early marine distribution of Atlantic salmon in the North‐east Atlantic: A genetically informed stock‐specific synthesis

J Gilbey, KR Utne, V Wennevik, AC Beck… - Fish and …, 2021 - Wiley Online Library
The survival of Atlantic salmon (Salmo salar), an increasingly rare anadromous species, has
declined dramatically during its marine phase, with disproportionate impacts on the poorly …

SSR‐seq: Genotyping of microsatellites using next‐generation sequencing reveals higher level of polymorphism as compared to traditional fragment size scoring

P Šarhanová, S Pfanzelt, R Brandt… - Ecology and …, 2018 - Wiley Online Library
Microsatellites (or simple sequence repeats, SSR) are widely used markers in population
genetics. Traditionally, genotyping was and still is carried out through recording fragment …

Resolving fine‐scale population structure and fishery exploitation using sequenced microsatellites in a northern fish

KKS Layton, B Dempson, PVR Snelgrove… - Evolutionary …, 2020 - Wiley Online Library
The resiliency of populations and species to environmental change is dependent on the
maintenance of genetic diversity, and as such, quantifying diversity is central to combating …