New insight into phytochromes: connecting structure to function

J Hughes, A Winkler - Annual review of plant biology, 2024 - annualreviews.org
Red and far-red light–sensing phytochromes are widespread in nature, occurring in plants,
algae, fungi, and prokaryotes. Despite at least a billion years of evolution, their photosensory …

Tips and turns of bacteriophytochrome photoactivation

H Takala, P Edlund, JA Ihalainen… - Photochemical & …, 2020 - pubs.rsc.org
Phytochromes are ubiquitous photosensor proteins, which control the growth, reproduction
and movement in plants, fungi and bacteria. Phytochromes switch between two …

Correlating structural and photochemical heterogeneity in cyanobacteriochrome NpR6012g4

S Lim, Q Yu, SM Gottlieb, CW Chang… - Proceedings of the …, 2018 - National Acad Sciences
Phytochrome photoreceptors control plant growth, development, and the shade avoidance
response that limits crop yield in high-density agricultural plantings. Cyanobacteriochromes …

Frontiers in multiscale modeling of photoreceptor proteins

M Mroginski, S Adam, GS Amoyal… - Photochemistry and …, 2021 - Wiley Online Library
This perspective article highlights the challenges in the theoretical description of
photoreceptor proteins using multiscale modeling, as discussed at the CECAM workshop in …

On the Role of a Conserved Tryptophan in the Chromophore Pocket of Cyanobacteriochrome

M Blain-Hartung, GJ von Sass, J Plaickner… - Journal of Molecular …, 2024 - Elsevier
The cyanobacteriochrome Slr1393 can be photoconverted between a red (Pr) and green
absorbing form (Pg). The recently determined crystal structures of both states suggest a …

First-principles models for biological light-harvesting: phycobiliprotein complexes from cryptophyte algae

MK Lee, KB Bravaya, DF Coker - Journal of the American …, 2017 - ACS Publications
There have been numerous efforts, both experimental and theoretical, that have attempted
to parametrize model Hamiltonians to describe excited state energy transfer in …

Improved fluorescent phytochromes for in situ imaging

S Nagano, M Sadeghi, J Balke, M Fleck… - Scientific Reports, 2022 - nature.com
Modern biology investigations on phytochromes as near-infrared fluorescent pigments pave
the way for the development of new biosensors, as well as for optogenetics and in vivo …

Histidine protonation controls structural heterogeneity in the cyanobacteriochrome AnPixJg2

AG Rao, C Wiebeler, S Sen, DS Cerutti… - Physical Chemistry …, 2021 - pubs.rsc.org
Cyanobacteriochromes are compact and spectrally diverse photoreceptor proteins that bind
a linear tetrapyrrole as a chromophore. They show photochromicity by having two stable …

Protonation of the biliverdin IXα chromophore in the red and far-red photoactive states of a bacteriophytochrome

V Modi, S Donnini, G Groenhof… - The Journal of Physical …, 2019 - ACS Publications
The tetrapyrrole chromophore biliverdin IXα (BV) in the bacteriophytochrome from
Deinococcus radiodurans (DrBphP) is usually assumed to be fully protonated, but this …

3D structures of plant phytochrome A as Pr and Pfr from solid-state NMR: implications for molecular function

C Song, MA Mroginski, C Lang, J Kopycki… - Frontiers in plant …, 2018 - frontiersin.org
We present structural information for oat phyA3 in the far-red-light-absorbing (Pfr) signaling
state, to our knowledge the first three-dimensional (3D) information for a plant phytochrome …