Glycoproteomics
Protein glycosylation involves the co-translational or post-translational addition of glycans to
proteins and is a crucial protein modification in health and disease. The aim of …
proteins and is a crucial protein modification in health and disease. The aim of …
[PDF][PDF] Proteogenomic data and resources for pan-cancer analysis
Summary The National Cancer Institute's Clinical Proteomic Tumor Analysis Consortium
(CPTAC) investigates tumors from a proteogenomic perspective, creating rich multi-omics …
(CPTAC) investigates tumors from a proteogenomic perspective, creating rich multi-omics …
[PDF][PDF] Proteogenomic characterization of pancreatic ductal adenocarcinoma
Pancreatic ductal adenocarcinoma (PDAC) is a highly aggressive cancer with poor patient
survival. Toward understanding the underlying molecular alterations that drive PDAC …
survival. Toward understanding the underlying molecular alterations that drive PDAC …
A pragmatic guide to enrichment strategies for mass spectrometry–based glycoproteomics
Glycosylation is a prevalent, yet heterogeneous modification with a broad range of
implications in molecular biology. This heterogeneity precludes enrichment strategies that …
implications in molecular biology. This heterogeneity precludes enrichment strategies that …
Glycoproteomics-based signatures for tumor subtyping and clinical outcome prediction of high-grade serous ovarian cancer
Inter-tumor heterogeneity is a result of genomic, transcriptional, translational, and post-
translational molecular features. To investigate the roles of protein glycosylation in the …
translational molecular features. To investigate the roles of protein glycosylation in the …
Glycoinformatics in the artificial intelligence era
Artificial intelligence (AI) methods have been and are now being increasingly integrated in
prediction software implemented in bioinformatics and its glycoscience branch known as …
prediction software implemented in bioinformatics and its glycoscience branch known as …
Cell-type-specific labeling and profiling of glycans in living mice
Metabolic labeling of glycans with clickable unnatural sugars has enabled glycan analysis in
multicellular systems. However, cell-type-specific labeling of glycans in vivo remains …
multicellular systems. However, cell-type-specific labeling of glycans in vivo remains …
[PDF][PDF] Mapping physiological ADP-ribosylation using activated ion electron transfer dissociation
SC Buch-Larsen, IA Hendriks, JM Lodge, M Rykær… - Cell reports, 2020 - cell.com
ADP-ribosylation (ADPr) is a post-translational modification that plays pivotal roles in a wide
range of cellular processes. Mass spectrometry (MS)-based analysis of ADPr under …
range of cellular processes. Mass spectrometry (MS)-based analysis of ADPr under …
O-GlcNAcAtlas: A database of experimentally identified O-GlcNAc sites and proteins
O-linked β-N-acetylglucosamine (O-GlcNAc) is a post-translational modification (ie, O-
GlcNAcylation) on the serine/threonine residues of proteins. As a unique intracellular …
GlcNAcylation) on the serine/threonine residues of proteins. As a unique intracellular …
qPTM: an updated database for PTM dynamics in human, mouse, rat and yeast
K Yu, Y Wang, Y Zheng, Z Liu, Q Zhang… - Nucleic Acids …, 2023 - academic.oup.com
Post-translational modifications (PTMs) are critical molecular mechanisms that regulate
protein functions temporally and spatially in various organisms. Since most PTMs are …
protein functions temporally and spatially in various organisms. Since most PTMs are …