Fun (gi) omics: Advanced and diverse technologies to explore emerging fungal pathogens and define mechanisms of antifungal resistance

B Ball, M Langille, J Geddes-McAlister - MBio, 2020 - Am Soc Microbiol
The landscape of infectious fungal agents includes previously unidentified or rare
pathogens with the potential to cause unprecedented casualties in biodiversity, food …

Importance of Clinical Isolates in Cryptococcus neoformans Research

KM Jackson, M Ding, K Nielsen - Journal of Fungi, 2023 - mdpi.com
The human pathogenic fungus Cryptococcus neoformans is a global health concern.
Previous research in the field has focused on studies using reference strains to identify …

Gene expression of diverse Cryptococcus isolates during infection of the human central nervous system

CH Yu, P Sephton-Clark, JL Tenor, DL Toffaletti… - Mbio, 2021 - Am Soc Microbiol
Cryptococcus neoformans is a major human central nervous system (CNS) fungal pathogen
causing considerable morbidity and mortality. In this study, we provide the widest view to …

A fungal lytic polysaccharide monooxygenase is required for cell wall integrity, thermotolerance, and virulence of the fungal human pathogen Cryptococcus …

C Probst, M Hallas-Møller, JØ Ipsen, JT Brooks… - PLOS …, 2023 - journals.plos.org
Fungi often adapt to environmental stress by altering their size, shape, or rate of cell division.
These morphological changes require reorganization of the cell wall, a structural feature …

Cross-reactivity between vaccine antigens from the chitin deacetylase protein family improves survival in a mouse model of cryptococcosis

MM Hester, LVN Oliveira, R Wang, Z Mou… - Frontiers in …, 2022 - frontiersin.org
Meningitis due to the fungal pathogen Cryptococcus neoformans is estimated to cause
nearly 200,000 deaths annually, mostly in resource-limited regions. We previously identified …

Long Non-Coding RNAs in Cryptococcus neoformans: Insights Into Fungal Pathogenesis

MC Kalem, JC Panepinto - Frontiers in Cellular and Infection …, 2022 - frontiersin.org
Long non-coding RNAs (lncRNAs) are highly expressed and can modulate multiple cellular
processes including transcription, splicing, translation, and many diverse signaling events …

Comparative genomics of the closely related fungal genera Cryptococcus and Kwoniella reveals karyotype dynamics and suggests evolutionary mechanisms of …

MA Coelho, M David-Palma, T Shea, K Bowers… - PLoS …, 2024 - journals.plos.org
In exploring the evolutionary trajectories of both pathogenesis and karyotype dynamics in
fungi, we conducted a large-scale comparative genomic analysis spanning the …

Application of an optimized annotation pipeline to the Cryptococcus deuterogattii genome reveals dynamic primary metabolic gene clusters and genomic impact of …

PA Gröhs Ferrareze, C Maufrais, R Silva Araujo Streit… - G3, 2021 - academic.oup.com
Evaluating the quality of a de novo annotation of a complex fungal genome based on RNA-
seq data remains a challenge. In this study, we sequentially optimized a Cufflinks …

Amoeba predation of Cryptococcus: A quantitative and population genomic evaluation of the accidental pathogen hypothesis

TJC Sauters, C Roth, D Murray, S Sun… - PLoS …, 2023 - journals.plos.org
The “Amoeboid Predator-Fungal Animal Virulence Hypothesis” posits that interactions with
environmental phagocytes shape the evolution of virulence traits in fungal pathogens. In this …

Cryptococcus neoformans releases proteins during intracellular residence that affect the outcome of the fungal–macrophage interaction

EH Jung, YD Park, Q Dragotakes, LS Ramirez… - …, 2022 - academic.oup.com
Cryptococcus neoformans is a facultative intracellular pathogen that can replicate and
disseminate in mammalian macrophages. In this study, we analyzed fungal proteins …