DiseaseMeth version 2.0: a major expansion and update of the human disease methylation database
The human disease methylation database (DiseaseMeth, http://bioinfo. hrbmu. edu.
cn/diseasemeth/) is an interactive database that aims to present the most complete …
cn/diseasemeth/) is an interactive database that aims to present the most complete …
Mammalian epigenetic mechanisms
G Zhang, S Pradhan - IUBMB life, 2014 - Wiley Online Library
The mammalian genome is packaged into chromatin that is further compacted into three‐
dimensional structures consisting of distinct functional domains. The higher order structure …
dimensional structures consisting of distinct functional domains. The higher order structure …
EWAS Atlas: a curated knowledgebase of epigenome-wide association studies
Abstract Epigenome-Wide Association Study (EWAS) has become increasingly significant in
identifying the associations between epigenetic variations and different biological traits. In …
identifying the associations between epigenetic variations and different biological traits. In …
MethHC: a database of DNA methylation and gene expression in human cancer
Abstract We present MethHC (http://MethHC. mbc. nctu. edu. tw), a database comprising a
systematic integration of a large collection of DNA methylation data and mRNA/microRNA …
systematic integration of a large collection of DNA methylation data and mRNA/microRNA …
TSGene: a web resource for tumor suppressor genes
Tumor suppressor genes (TSGs) are guardian genes that play important roles in controlling
cell proliferation processes such as cell-cycle checkpoints and inducing apoptosis …
cell proliferation processes such as cell-cycle checkpoints and inducing apoptosis …
[HTML][HTML] Identification of hub genes in prostate cancer using robust rank aggregation and weighted gene co-expression network analysis
The pathogenic mechanisms of prostate cancer (PCa) remain to be defined. In this study, we
utilized the Robust Rank Aggregation (RRA) method to integrate 10 eligible PCa microarray …
utilized the Robust Rank Aggregation (RRA) method to integrate 10 eligible PCa microarray …
Umap and Bismap: quantifying genome and methylome mappability
Short-read sequencing enables assessment of genetic and biochemical traits of individual
genomic regions, such as the location of genetic variation, protein binding and chemical …
genomic regions, such as the location of genetic variation, protein binding and chemical …
Biological databases for human research
The completion of the Human Genome Project lays a foundation for systematically studying
the human genome from evolutionary history to precision medicine against diseases. With …
the human genome from evolutionary history to precision medicine against diseases. With …
Zinc finger readers of methylated DNA
NO Hudson, BA Buck-Koehntop - Molecules, 2018 - mdpi.com
DNA methylation is a prevalent epigenetic modification involved in regulating a number of
essential cellular processes, including genomic accessibility and transcriptional outcomes …
essential cellular processes, including genomic accessibility and transcriptional outcomes …