The Mediator complex as a master regulator of transcription by RNA polymerase II
WF Richter, S Nayak, J Iwasa, DJ Taatjes - Nature Reviews Molecular …, 2022 - nature.com
The Mediator complex, which in humans is 1.4 MDa in size and includes 26 subunits,
controls many aspects of RNA polymerase II (Pol II) function. Apart from its size, a defining …
controls many aspects of RNA polymerase II (Pol II) function. Apart from its size, a defining …
Regulation of the RNA polymerase II pre-initiation complex by its associated coactivators
S Malik, RG Roeder - Nature Reviews Genetics, 2023 - nature.com
Abstract The RNA polymerase II (Pol II) pre-initiation complex (PIC) is a critical node in
eukaryotic transcription regulation, and its formation is the major rate-limiting step in …
eukaryotic transcription regulation, and its formation is the major rate-limiting step in …
Enhancer–promoter contact formation requires RNAPII and antagonizes loop extrusion
Homotypic chromatin interactions and loop extrusion are thought to be the two main drivers
of mammalian chromosome folding. Here we tested the role of RNA polymerase II (RNAPII) …
of mammalian chromosome folding. Here we tested the role of RNA polymerase II (RNAPII) …
3D enhancer-promoter interactions and multi-connected hubs: Organizational principles and functional roles
CM Uyehara, E Apostolou - Cell reports, 2023 - cell.com
The spatiotemporal control of gene expression is dependent on the activity of cis-acting
regulatory sequences, called enhancers, which regulate target genes over variable genomic …
regulatory sequences, called enhancers, which regulate target genes over variable genomic …
The Polycomb system sustains promoters in a deep OFF state by limiting pre-initiation complex formation to counteract transcription
The Polycomb system has fundamental roles in regulating gene expression during
mammalian development. However, how it controls transcription to enable gene repression …
mammalian development. However, how it controls transcription to enable gene repression …
YY1-controlled regulatory connectivity and transcription are influenced by the cell cycle
Few transcription factors have been examined for their direct roles in physically connecting
enhancers and promoters. Here acute degradation of Yin Yang 1 (YY1) in erythroid cells …
enhancers and promoters. Here acute degradation of Yin Yang 1 (YY1) in erythroid cells …
The Mediator complex regulates enhancer-promoter interactions
S Ramasamy, A Aljahani, MA Karpinska… - Nature Structural & …, 2023 - nature.com
Enhancer-mediated gene activation generally requires physical proximity between
enhancers and their target gene promoters. However, the molecular mechanisms by which …
enhancers and their target gene promoters. However, the molecular mechanisms by which …
Regulating specificity in enhancer–promoter communication
CC Galouzis, EEM Furlong - Current Opinion in Cell Biology, 2022 - Elsevier
Enhancers are cis-regulatory elements that can activate transcription remotely to regulate a
specific pattern of a gene's expression. Genes typically have many enhancers that are often …
specific pattern of a gene's expression. Genes typically have many enhancers that are often …
Functional organization of RNA polymerase II in nuclear subcompartments
K Rippe, A Papantonis - Current Opinion in Cell Biology, 2022 - Elsevier
Distinct clusters of RNA polymerase II are responsible for gene transcription inside
eukaryotic cell nuclei. Despite the functional implications of such subnuclear organization …
eukaryotic cell nuclei. Despite the functional implications of such subnuclear organization …
Molecular architecture of enhancer–promoter interaction
K Hamamoto, T Fukaya - Current opinion in cell biology, 2022 - Elsevier
Temporal and spatial specificity of gene expression is highly regulated through a rich milieu
of regulatory DNAs embedded in the genome. Enhancers represent a major class of …
of regulatory DNAs embedded in the genome. Enhancers represent a major class of …