In Silico Constraint-Based Strain Optimization Methods: the Quest for Optimal Cell Factories
Shifting from chemical to biotechnological processes is one of the cornerstones of 21st
century industry. The production of a great range of chemicals via biotechnological means is …
century industry. The production of a great range of chemicals via biotechnological means is …
Metabolic engineering for enhancing microbial biosynthesis of advanced biofuels
Increasing global energy demand and environmental concerns associated with petroleum
have raised interest in biofuels for reducing dependency on crude oil and promote carbon …
have raised interest in biofuels for reducing dependency on crude oil and promote carbon …
Flux analysis and metabolomics for systematic metabolic engineering of microorganisms
Rational engineering of metabolism is important for bio-production using microorganisms.
Metabolic design based on in silico simulations and experimental validation of the metabolic …
Metabolic design based on in silico simulations and experimental validation of the metabolic …
Genome-scale modeling for metabolic engineering
E Simeonidis, ND Price - Journal of Industrial Microbiology and …, 2015 - academic.oup.com
We focus on the application of constraint-based methodologies and, more specifically, flux
balance analysis in the field of metabolic engineering, and enumerate recent developments …
balance analysis in the field of metabolic engineering, and enumerate recent developments …
A novel pathway to produce butanol and isobutanol in Saccharomyces cerevisiae
P Branduardi, V Longo, NM Berterame, G Rossi… - Biotechnology for …, 2013 - Springer
Background The sustainable production of biofuels remains one of the major issues of the
upcoming years. Among the number of most desirable molecules to be produced, butanol …
upcoming years. Among the number of most desirable molecules to be produced, butanol …
Increased 3-hydroxypropionic acid production from glycerol, by modification of central metabolism in Escherichia coli
Abstract Background 3-hydroxypropionic acid (3HP) is an important chemical precursor for
the production of bioplastics. Microbial production of 3HP from glycerol has previously been …
the production of bioplastics. Microbial production of 3HP from glycerol has previously been …
FastPros: screening of reaction knockout strategies for metabolic engineering
Motivation: Although constraint-based flux analysis of knockout strains has facilitated the
production of desirable metabolites in microbes, current screening methods have placed a …
production of desirable metabolites in microbes, current screening methods have placed a …
Application of adaptive laboratory evolution to overcome a flux limitation in an Escherichia coli production strain
K Tokuyama, Y Toya, T Horinouchi… - Biotechnology and …, 2018 - Wiley Online Library
Gene deletion strategies using flux balance analysis (FBA) have improved the growth‐
coupled production of various compounds. However, the productivities were often below the …
coupled production of various compounds. However, the productivities were often below the …
Microbial n‐butanol production from Clostridia to non‐Clostridial hosts
P Branduardi, F De Ferra, V Longo… - Engineering in Life …, 2014 - Wiley Online Library
In the context of the global objective of shifting from petroleum to a biomass‐based
economy, the research on fermentative strategies to produce alternative biofuels and …
economy, the research on fermentative strategies to produce alternative biofuels and …
Recent advances in metabolic engineering–integration of in silico design and experimental analysis of metabolic pathways
Microorganisms are widely used to produce valuable compounds. Because thousands of
metabolic reactions occur simultaneously and many metabolic reactions are related to target …
metabolic reactions occur simultaneously and many metabolic reactions are related to target …