Cis-regulatory sequences in plants: their importance, discovery, and future challenges

RJ Schmitz, E Grotewold, M Stam - The plant cell, 2022 - academic.oup.com
The identification and characterization of cis-regulatory DNA sequences and how they
function to coordinate responses to developmental and environmental cues is of paramount …

Agrobacterium-Mediated Plant Transformation: the Biology behind the “Gene-Jockeying” Tool

SB Gelvin - Microbiology and molecular biology reviews, 2003 - Am Soc Microbiol
Agrobacterium tumefaciens and related Agrobacterium species have been known as plant
pathogens since the beginning of the 20th century. However, only in the past two decades …

[HTML][HTML] The phenylpropanoid pathway in Arabidopsis

CM Fraser, C Chapple - … Book/American Society of Plant Biologists, 2011 - ncbi.nlm.nih.gov
The phenylpropanoid pathway serves as a rich source of metabolites in plants, being
required for the biosynthesis of lignin, and serving as a starting point for the production of …

Efflux-dependent auxin gradients establish the apical–basal axis of Arabidopsis

J Friml, A Vieten, M Sauer, D Weijers, H Schwarz… - Nature, 2003 - nature.com
Axis formation occurs in plants, as in animals, during early embryogenesis. However, the
underlying mechanism is not known. Here we show that the first manifestation of the apical …

The development of Arabidopsis as a model plant

M Koornneef, D Meinke - The plant journal, 2010 - Wiley Online Library
Twenty‐five years ago, Arabidopsis thaliana emerged as the model organism of choice for
research in plant biology. A consensus was reached about the need to focus on a single …

Rapid degradation of a large fraction of newly synthesized proteins by proteasomes

U Schubert, LC Anton, J Gibbs, CC Norbury… - Nature, 2000 - nature.com
MHC class I molecules function to present peptides eight to ten residues long to the immune
system. These peptides originate primarily from a cytosolic pool of proteins through the …

ABC transporter AtABCG25 is involved in abscisic acid transport and responses

T Kuromori, T Miyaji, H Yabuuchi… - Proceedings of the …, 2010 - National Acad Sciences
Abscisic acid (ABA) is one of the most important phytohormones involved in abiotic stress
responses, seed maturation, germination, and senescence. ABA is predominantly produced …

Redundant ERF-VII Transcription Factors Bind to an Evolutionarily Conserved cis-Motif to Regulate Hypoxia-Responsive Gene Expression in Arabidopsis

P Gasch, M Fundinger, JT Müller, T Lee… - The Plant …, 2016 - academic.oup.com
The response of Arabidopsis thaliana to low-oxygen stress (hypoxia), such as during shoot
submergence or root waterlogging, includes increasing the levels of∼ 50 hypoxia …

Epigenetic reprogramming and small RNA silencing of transposable elements in pollen

RK Slotkin, M Vaughn, F Borges, M Tanurdžić… - Cell, 2009 - cell.com
The mutagenic activity of transposable elements (TEs) is suppressed by epigenetic silencing
and small interfering RNAs (siRNAs), especially in gametes that could transmit transposed …

Hi-C analysis in Arabidopsis identifies the KNOT, a structure with similarities to the flamenco locus of Drosophila

S Grob, MW Schmid, U Grossniklaus - Molecular cell, 2014 - cell.com
Chromosomes are folded, spatially organized, and regulated by epigenetic marks. How
chromosomal architecture is connected to the epigenome is not well understood. We show …