[HTML][HTML] Simulation-based approaches for drug delivery systems: Navigating advancements, opportunities, and challenges
I Salahshoori, M Golriz, MAL Nobre, S Mahdavi… - Journal of Molecular …, 2024 - Elsevier
Efficient drug delivery systems (DDSs) play a pivotal role in ensuring pharmaceuticals'
targeted and effective administration. However, the intricate interplay between drug …
targeted and effective administration. However, the intricate interplay between drug …
Improvement of conventional anti-cancer drugs as new tools against multidrug resistant tumors
S Dallavalle, V Dobričić, L Lazzarato, E Gazzano… - Drug Resistance …, 2020 - Elsevier
Multidrug resistance (MDR) is the dominant cause of the failure of cancer chemotherapy.
The design of antitumor drugs that are able to evade MDR is rapidly evolving, showing that …
The design of antitumor drugs that are able to evade MDR is rapidly evolving, showing that …
Fluorescent Flippers: Small‐Molecule Probes to Image Membrane Tension in Living Systems
XX Chen, F Bayard, N Gonzalez‐Sanchis… - Angewandte …, 2023 - Wiley Online Library
Flipper probes have been introduced as small molecule fluorophores to image physical
forces, that is, membrane tension in living systems. Their emergence over one decade is …
forces, that is, membrane tension in living systems. Their emergence over one decade is …
Constant ph molecular dynamics simulations: Current status and recent applications
Many important protein functions are carried out through proton-coupled conformational
dynamics. Thus, the ability to accurately model protonation states dynamically has wide …
dynamics. Thus, the ability to accurately model protonation states dynamically has wide …
Titratable Martini model for constant pH simulations
In this work, we deliver a proof of concept for a fast method that introduces pH effects into
classical coarse-grained (CG) molecular dynamics simulations. Our approach is based upon …
classical coarse-grained (CG) molecular dynamics simulations. Our approach is based upon …
[HTML][HTML] Membrane permeability of small molecules from unbiased molecular dynamics simulations
Permeation of many small molecules through lipid bilayers can be directly observed in
molecular dynamics simulations on the nano-and microsecond timescale. While unbiased …
molecular dynamics simulations on the nano-and microsecond timescale. While unbiased …
Mechanistic understanding from molecular dynamics in pharmaceutical research 2: lipid membrane in drug design
We review the use of molecular dynamics (MD) simulation as a drug design tool in the
context of the role that the lipid membrane can play in drug action, ie, the interaction …
context of the role that the lipid membrane can play in drug action, ie, the interaction …
Predictions from First-Principles of Membrane Permeability to Small Molecules: How Useful Are They in Practice?
C Chipot - Journal of Chemical Information and Modeling, 2023 - ACS Publications
Predicting from first-principles the rate of passive permeation of small molecules across the
biological membrane represents a promising strategy for screening lead compounds …
biological membrane represents a promising strategy for screening lead compounds …
Recent experimental developments in studying passive membrane transport of drug molecules
M Sharifian Gh - Molecular Pharmaceutics, 2021 - ACS Publications
The ability to measure the passive membrane permeation of drug-like molecules is of
fundamental biological and pharmaceutical importance. Of significance, passive diffusion …
fundamental biological and pharmaceutical importance. Of significance, passive diffusion …
The lysosomotropic activity of hydrophobic weak base drugs is mediated via their intercalation into the lysosomal membrane
Lipophilic weak base therapeutic agents, termed lysosomotropic drugs (LDs), undergo
marked sequestration and concentration within lysosomes, hence altering lysosomal …
marked sequestration and concentration within lysosomes, hence altering lysosomal …