[HTML][HTML] Best practices on the differential expression analysis of multi-species RNA-seq
Advances in transcriptome sequencing allow for simultaneous interrogation of differentially
expressed genes from multiple species originating from a single RNA sample, termed dual …
expressed genes from multiple species originating from a single RNA sample, termed dual …
A roadmap for research in octoploid strawberry
VM Whitaker, SJ Knapp, MA Hardigan… - Horticulture …, 2020 - academic.oup.com
The cultivated strawberry (Fragaria× ananassa) is an allo-octoploid species, originating
nearly 300 years ago from wild progenitors from the Americas. Since that time the strawberry …
nearly 300 years ago from wild progenitors from the Americas. Since that time the strawberry …
Coordinated bacterial and plant sulfur metabolism in Enterobacter sp. SA187–induced plant salt stress tolerance
Enterobacter sp. SA187 is a root endophytic bacterium that maintains growth and yield of
plants under abiotic stress conditions. In this work, we compared the metabolic wirings of …
plants under abiotic stress conditions. In this work, we compared the metabolic wirings of …
The hidden world within plants: metatranscriptomics unveils the complexity of wood microbiomes
The importance of plants as complex entities influenced by genomes of the associated
microorganisms is now seen as a new source of variability for a more sustainable …
microorganisms is now seen as a new source of variability for a more sustainable …
[HTML][HTML] The road to resistance in forest trees
In recent years, forests have been exposed to an unprecedented rise in pests and
pathogens. This, coupled with the added challenge of climate change, renders forest …
pathogens. This, coupled with the added challenge of climate change, renders forest …
[HTML][HTML] Phyto-friendly soil bacteria and fungi provide beneficial outcomes in the host plant by differently modulating its responses through (in) direct mechanisms
Sustainable agricultural systems based on the application of phyto-friendly bacteria and
fungi are increasingly needed to preserve soil fertility and microbial biodiversity, as well as …
fungi are increasingly needed to preserve soil fertility and microbial biodiversity, as well as …
[HTML][HTML] Dual RNA Sequencing of Vitis vinifera during Lasiodiplodia theobromae Infection Unveils Host–Pathogen Interactions
MFM Gonçalves, RB Nunes, L Tilleman… - International journal of …, 2019 - mdpi.com
Lasiodiplodia theobromae is one of the most aggressive agents of the grapevine trunk
disease Botryosphaeria dieback. Through a dual RNA-sequencing approach, this study …
disease Botryosphaeria dieback. Through a dual RNA-sequencing approach, this study …
[HTML][HTML] Molecular mechanisms of the stripe rust interaction with resistant and susceptible wheat genotypes
T Nazarov, Y Liu, X Chen, DR See - International Journal of Molecular …, 2024 - mdpi.com
Rust fungi cause significant damage to wheat production worldwide. In order to mitigate
disease impact and improve food security via durable resistance, it is important to …
disease impact and improve food security via durable resistance, it is important to …
Mass spectrometry‐based forest tree metabolomics
Research in forest tree species has advanced slowly when compared with other agricultural
crops and model organisms, mainly due to the long‐life cycles, large genome sizes, and …
crops and model organisms, mainly due to the long‐life cycles, large genome sizes, and …
Transcriptome analysis of Citrus sinensis reveals potential responsive events triggered by Candidatus Liberibacter asiaticus
C Liu, X Chang, F Li, Y Yan, X Zuo, G Huang, R Li - Protoplasma, 2024 - Springer
Citrus Huanglongbing (HLB), caused by Candidatus Liberibacter asiaticus (CLas), is a
devastating immune-mediated disorder that has a detrimental effect on the citrus industry …
devastating immune-mediated disorder that has a detrimental effect on the citrus industry …