[Retracted] A Comprehensive Review of Performance of Next‐Generation Sequencing Platforms

MT Pervez, MJ Hasnain, SH Abbas… - BioMed Research …, 2022 - Wiley Online Library
Background. Next‐generation sequencing methods have been developed and proposed to
investigate any query in genomics or clinical activity involving DNA. Technical advancement …

Advanced methods for natural products discovery: bioactivity screening, dereplication, metabolomics profiling, genomic sequencing, databases and informatic tools …

SP Gaudêncio, E Bayram, L Lukić Bilela, M Cueto… - Marine drugs, 2023 - mdpi.com
Natural Products (NP) are essential for the discovery of novel drugs and products for
numerous biotechnological applications. The NP discovery process is expensive and time …

Benchmarking second and third-generation sequencing platforms for microbial metagenomics

V Meslier, B Quinquis, K Da Silva, F Plaza Oñate… - Scientific Data, 2022 - nature.com
Shotgun metagenomic sequencing is a common approach for studying the taxonomic
diversity and metabolic potential of complex microbial communities. Current methods …

Artificial intelligence, healthcare, clinical genomics, and pharmacogenomics approaches in precision medicine

H Abdelhalim, A Berber, M Lodi, R Jain, A Nair… - Frontiers in …, 2022 - frontiersin.org
Precision medicine has greatly aided in improving health outcomes using earlier diagnosis
and better prognosis for chronic diseases. It makes use of clinical data associated with the …

RNA sequencing for research and diagnostics in clinical oncology

A Buzdin, M Sorokin, A Garazha, A Glusker… - Seminars in cancer …, 2020 - Elsevier
Molecular diagnostics is becoming one of the major drivers of personalized oncology. With
hundreds of different approved anticancer drugs and regimens of their administration …

Environmental DNA: A new low-cost monitoring tool for pathogens in salmonid aquaculture

L Peters, S Spatharis, MA Dario, T Dwyer… - Frontiers in …, 2018 - frontiersin.org
Environmental DNA (eDNA) metabarcoding is a relatively new monitoring tool featuring in
an increasing number of applications such as the facilitation of the accurate and cost …

Global meta-analysis of urine microbiome: colonization of polycyclic aromatic hydrocarbon–degrading bacteria among bladder cancer patients

L Bukavina, I Isali, R Ginwala, M Sindhani… - European Urology …, 2023 - Elsevier
Background The application of next-generation sequencing techniques has enabled
characterization of urinary tract microbiome. Although many studies have demonstrated …

[HTML][HTML] Preanalytic variables and tissue stewardship for reliable next-generation sequencing (NGS) clinical analysis

PA Ascierto, C Bifulco, G Palmieri, S Peters… - The Journal of Molecular …, 2019 - Elsevier
An enduring goal of personalized medicine in cancer is the ability to identify patients who
are likely to respond to specific therapies. Our growing understanding of the biology and …

RNA-seq and ChIP-seq as complementary approaches for comprehension of plant transcriptional regulatory mechanism

II Muhammad, SL Kong, SN Akmar Abdullah… - International journal of …, 2019 - mdpi.com
The availability of data produced from various sequencing platforms offer the possibility to
answer complex questions in plant research. However, drawbacks can arise when there are …

Human papillomavirus detection by whole-genome next-generation sequencing: importance of validation and quality assurance procedures

LS Arroyo Mühr, D Guerendiain, K Cuschieri… - Viruses, 2021 - mdpi.com
Next-generation sequencing (NGS) yields powerful opportunities for studying human
papillomavirus (HPV) genomics for applications in epidemiology, public health, and clinical …