Identification of important genomic footprints using eight different selection signature statistics in domestic cattle breeds

D Rajawat, M Panigrahi, H Kumar, SS Nayak, S Parida… - Gene, 2022 - Elsevier
In the present study, the population genomic data of different cattle breeds were explored to
decipher the genomic regions affected due to selective events and reflected in the …

Selection signatures in two oldest Russian native cattle breeds revealed using high-density single nucleotide polymorphism analysis

NA Zinovieva, AV Dotsev, AA Sermyagin… - PLoS …, 2020 - journals.plos.org
Native cattle breeds can carry specific signatures of selection reflecting their adaptation to
the local environmental conditions and response to the breeding strategy used. In this study …

A gene-set enrichment and protein–protein interaction network-based GWAS with regulatory SNPs identifies candidate genes and pathways associated with carcass …

K Srikanth, SH Lee, KY Chung, JE Park, GW Jang… - Genes, 2020 - mdpi.com
Non-synonymous SNPs and protein coding SNPs within the promoter region of genes
(regulatory SNPs) might have a significant effect on carcass traits. Imputed sequence level …

Genetic basis of improving the palatability of beef cattle: current insights

JD Leal-Gutiérrez, RG Mateescu - Food Biotechnology, 2019 - Taylor & Francis
Beef palatability is a complex concept and could be described through an array of features
such as tenderness, juiciness and flavor traits. Improving the eating experience when …

Genomic inbreeding and runs of homozygosity analysis of indigenous cattle populations in southern China

Y Liu, G Zhao, X Lin, J Zhang, G Hou, L Zhang, D Liu… - Plos one, 2022 - journals.plos.org
Runs of homozygosity (ROH) are continuous homozygous segments from the common
ancestor of parents. Evaluating ROH pattern can help to understand inbreeding level and …

Comparison of protein differences between high-and low-quality goat and bovine parts based on iTRAQ technology

Y Wei, X Li, D Zhang, Y Liu - Food Chemistry, 2019 - Elsevier
This study was designed to investigate the differences in the proteomes of high-and low-
quality goat and bovine muscles. In total, 364 and 111 differentially expressed proteins …

Candidate pigmentation genes related to feather color variation in an indigenous chicken breed revealed by whole genome data

H Wang, J Wen, H Li, T Zhu, X Zhao, J Zhang… - Frontiers in …, 2022 - frontiersin.org
Chicken plumage color is an inheritable phenotype that was naturally and artificially
selected for during domestication. The Baicheng You chicken is an indigenous Chinese …

Within-and between-breed selection signatures in the original and improved valachian sheep

M Mészárosová, G Mészáros, N Moravčíková, I Pavlík… - Animals, 2022 - mdpi.com
Simple Summary Each country has their own national breeds that are well adapted to the
local climate and other conditions. Our study examines two national sheep breeds from …

Dissecting the genomic regions of selection on the X chromosome in different cattle breeds

D Rajawat, M Panigrahi, SS Nayak, B Bhushan… - 3 Biotech, 2024 - Springer
Mammalian X and Y chromosomes independently evolved from various autosomes
approximately 300 million years ago (MYA). To fully understand the relationship between …

Genome-wide association study for carcass primal cut yields using single-step Bayesian approach in Hanwoo cattle

M Naserkheil, H Mehrban, D Lee, MN Park - Frontiers in Genetics, 2021 - frontiersin.org
The importance of meat and carcass quality is growing in beef cattle production to meet both
producer and consumer demands. Primal cut yields, which reflect the body compositions of …