Mitochondrial medicine in the omics era

J Rahman, S Rahman - The Lancet, 2018 - thelancet.com
Mitochondria are dynamic bioenergetic organelles whose maintenance requires around
1500 proteins from two genomes. Mutations in either the mitochondrial or nuclear genome …

POSTAR3: an updated platform for exploring post-transcriptional regulation coordinated by RNA-binding proteins

W Zhao, S Zhang, Y Zhu, X Xi, P Bao, Z Ma… - Nucleic Acids …, 2022 - academic.oup.com
RNA-binding proteins (RBPs) play key roles in post-transcriptional regulation. Accurate
identification of RBP binding sites in multiple cell lines and tissue types from diverse species …

Mitochondrial disease genetics update: recent insights into the molecular diagnosis and expanding phenotype of primary mitochondrial disease

EM McCormick, Z Zolkipli-Cunningham… - Current opinion in …, 2018 - journals.lww.com
Broad-based exome sequencing has become the standard first-line diagnostic approach for
PMD. This has facilitated more rapid and accurate disease identification, and greatly …

Mitochondrial DNA variation across 56,434 individuals in gnomAD

KM Laricchia, NJ Lake, NA Watts, M Shand… - Genome …, 2022 - genome.cshlp.org
Genomic databases of allele frequency are extremely helpful for evaluating clinical variants
of unknown significance; however, until now, databases such as the Genome Aggregation …

Specifications of the ACMG/AMP standards and guidelines for mitochondrial DNA variant interpretation

EM McCormick, MT Lott, MC Dulik, L Shen… - Human …, 2020 - Wiley Online Library
Mitochondrial DNA (mtDNA) variant pathogenicity interpretation has special considerations
given unique features of the mtDNA genome, including maternal inheritance, variant …

Mitochondrial DNA alterations underlie an irreversible shift to aerobic glycolysis in fumarate hydratase–deficient renal cancer

DR Crooks, N Maio, M Lang, CJ Ricketts, CD Vocke… - Science …, 2021 - science.org
Understanding the mechanisms of the Warburg shift to aerobic glycolysis is critical to
defining the metabolic basis of cancer. Hereditary leiomyomatosis and renal cell carcinoma …

The RD‐Connect Genome‐Phenome Analysis Platform: Accelerating diagnosis, research, and gene discovery for rare diseases

S Laurie, D Piscia, L Matalonga, A Corvó… - Human …, 2022 - Wiley Online Library
Rare disease patients are more likely to receive a rapid molecular diagnosis nowadays
thanks to the wide adoption of next‐generation sequencing. However, many cases remain …

Possible A2E mutagenic effects on RPE mitochondrial DNA from innovative RNA-seq bioinformatics pipeline

L Donato, C Scimone, S Alibrandi, A Pitruzzella… - Antioxidants, 2020 - mdpi.com
Mitochondria are subject to continuous oxidative stress stimuli that, over time, can impair
their genome and lead to several pathologies, like retinal degenerations. Our main purpose …

Cell reprogramming shapes the mitochondrial DNA landscape

W Wei, DJ Gaffney, PF Chinnery - Nature Communications, 2021 - nature.com
Individual induced pluripotent stem cells (iPSCs) show considerable phenotypic
heterogeneity, but the reasons for this are not fully understood. Comprehensively analysing …

HmtVar: a new resource for human mitochondrial variations and pathogenicity data

R Preste, O Vitale, R Clima, G Gasparre… - Nucleic acids …, 2019 - academic.oup.com
Interest in human mitochondrial genetic data is constantly increasing among both clinicians
and researchers, due to the involvement of mitochondrial DNA (mtDNA) in a number of …