[HTML][HTML] The ONIOM method and its applications

LW Chung, WMC Sameera, R Ramozzi… - Chemical …, 2015 - ACS Publications
The fields of theoretical and computational chemistry have come a long way since their
inception in the mid-20th century. Fifty years ago, only rudimentary approximations for very …

Computational electrochemistry: prediction of liquid-phase reduction potentials

AV Marenich, J Ho, ML Coote, CJ Cramer… - Physical Chemistry …, 2014 - pubs.rsc.org
This article reviews recent developments and applications in the area of computational
electrochemistry. Our focus is on predicting the reduction potentials of electron transfer and …

Aqueous solvation free energies of ions and ion− water clusters based on an accurate value for the absolute aqueous solvation free energy of the proton

CP Kelly, CJ Cramer, DG Truhlar - The Journal of Physical …, 2006 - ACS Publications
Thermochemical cycles that involve p K a, gas-phase acidities, aqueous solvation free
energies of neutral species, and gas-phase clustering free energies have been used with …

Optical absorption and electronic spectra of chlorophylls a and b

L Hedayatifar, E Irani, M Mazarei, S Rasti, YT Azar… - RSC …, 2016 - pubs.rsc.org
Photosynthesis includes capturing sunlight by an assembly of molecules, called
chlorophylls, and directing the harvested energy in the form of electronic excitations to the …

Reduction Potentials and Acidity Constants of Mn Superoxide Dismutase Calculated by QM/MM Free‐Energy Methods

J Heimdal, M Kaukonen, M Srnec, L Rulíšek… - …, 2011 - Wiley Online Library
We used two theoretical methods to estimate reduction potentials and acidity constants in
Mn superoxide dismutase (MnSOD), namely combined quantum mechanical and molecular …

Spectroscopic and kinetic studies of photochemical reaction of magnesium tetraphenylporphyrin with oxygen

J Zhang, P Zhang, Z Zhang, X Wei - The Journal of Physical …, 2009 - ACS Publications
Magnesium tetraphenylporphyrin (MgTPP) was synthesized from meso-
tetraphenylporphyrin (H2TPP) in N, N-dimethylformamide (DMF). The photochemical …

Interactions of copper (II) and zinc (II) with chlorophyll: insights from density functional theory studies

R Bechaieb, AB Fredj, AB Akacha… - New Journal of Chemistry, 2016 - pubs.rsc.org
The reaction of chlorophyll (a) with Cu2+ or Zn2+ in the presence of acetonitrile has been
studied on a slightly simplified model using DFT computations of three potential processes …

Photoinduced electron transfer occurs between 2-aminopurine and the DNA nucleic acid monophosphates: results from cyclic voltammetry and fluorescence …

M Narayanan, G Kodali, Y Xing… - The Journal of Physical …, 2010 - ACS Publications
2-Aminopurine (2AP) is a fluorescent adenine analogue that is useful in part because its
substantial fluorescence quantum yield is sensitive to base stacking with native bases in ss …

9,10‐Diphenylanthracene as a matrix for MALDI‐MS electron transfer secondary reactions

M Nazim Boutaghou, RB Cole - Journal of mass spectrometry, 2012 - Wiley Online Library
The most common secondary‐ionization mechanism in positive ion matrix‐assisted laser
desorption/ionization (MALDI) involves a proton transfer reaction to ionize the analyte …

Density functional theory study of tetrathiafulvalene and thianthrene in acetonitrile: Structure, dynamics, and redox properties

J VandeVondele, R Lynden-Bell… - The Journal of …, 2006 - ACS Publications
The redox potentials of the organic compounds tetrathiafulvalene (TTF) and thianthrene (TH)
in an explicit aprotic polar solvent, acetonitrile, have been computed using ab initio …