Decoding calcium signaling dynamics during Drosophila wing disc development

PA Brodskiy, Q Wu, DK Soundarrajan, FJ Huizar… - Biophysical journal, 2019 - cell.com
The robust specification of organ development depends on coordinated cell-cell
communication. This process requires signal integration among multiple pathways, relying …

Tools to reverse-engineer multicellular systems: case studies using the fruit fly

Q Wu, N Kumar, V Velagala, JJ Zartman - Journal of Biological …, 2019 - Springer
Reverse-engineering how complex multicellular systems develop and function is a grand
challenge for systems bioengineers. This challenge has motivated the creation of a suite of …

Image complexity guided network compression for biomedical image segmentation

S Mishra, DZ Chen, XS Hu - ACM Journal on Emerging Technologies in …, 2021 - dl.acm.org
Compression is a standard procedure for making convolutional neural networks (CNNs)
adhere to some specific computing resource constraints. However, searching for a …

Cascade decoder: A universal decoding method for biomedical image segmentation

P Liang, J Chen, H Zheng, L Yang… - 2019 IEEE 16th …, 2019 - ieeexplore.ieee.org
The Encoder-Decoder architecture is a main stream deep learning model for biomedical
image segmentation. The encoder fully compresses the input and generates encoded …

Densely Decoded Networks with Adaptive Deep Supervision for Medical Image Segmentation

S Mishra - arXiv preprint arXiv:2402.02649, 2024 - arxiv.org
Medical image segmentation using deep neural networks has been highly successful.
However, the effectiveness of these networks is often limited by inadequate dense prediction …

Multi-object dynamic memory network for cell tracking in time-lapse microscopy images

R Li, Q Gao, K Rohr - 2021 IEEE 18th International Symposium …, 2021 - ieeexplore.ieee.org
Cell tracking in time-lapse microscopy images is important to study biological processes. We
propose a new multi-object tracking method based on a dynamic memory network and …

[图书][B] New Deep Learning Methods for Biomedical Image Segmentation and Related Problems

P Liang - 2023 - search.proquest.com
Accurately identifying objects in biomedical images plays a crucial role in biomedical image
analysis, as it enables various downstream tasks such as cell behavior analysis and cancer …

[图书][B] Data-Driven Approaches for Biomedical Image Analysis

S Mishra - 2022 - search.proquest.com
Biomedical image analysis plays a vital role in disease investigation and computer-aided
diagnosis. Operations like target object segmentation, and classification are principal tools …

[图书][B] Dynamics of Calcium Signaling in Multicellular Systems: Quantitative Experiments and Computational Modelling

D Soundarrajan - 2022 - search.proquest.com
Abstract Development of fully functional organs from undifferentiated cells requires constant
communication between various participating cells. An important component in this cellular …

[图书][B] Calcium as a Signal Integrator in Drosophila Wing Imaginal Disc Development

PA Brodskiy - 2019 - search.proquest.com
Understanding organ development requires an understanding of how individual cells make
decisions, and how those decisions integrate into system-wide properties. However, in many …