PINK1-mediated mitophagy promotes oxidative phosphorylation and redox homeostasis to induce drug-tolerant persister cancer cells
Y Li, H Chen, X Xie, B Yang, X Wang, J Zhang, T Qiao… - Cancer Research, 2023 - AACR
The drug-tolerant persister (DTP) state enables cancer cells to evade cytotoxic stress from
anticancer therapy. However, the mechanisms governing DTP generation remain poorly …
anticancer therapy. However, the mechanisms governing DTP generation remain poorly …
MS-DAP platform for downstream data analysis of label-free proteomics uncovers optimal workflows in benchmark data sets and increased sensitivity in analysis of …
F Koopmans, KW Li, RV Klaassen… - Journal of Proteome …, 2022 - ACS Publications
In the rapidly moving proteomics field, a diverse patchwork of data analysis pipelines and
algorithms for data normalization and differential expression analysis is used by the …
algorithms for data normalization and differential expression analysis is used by the …
Deciphering the structure, function, and mechanism of lysine acetyltransferase cGNAT2 in cyanobacteria
K Jia, M Yang, X Liu, Q Zhang, G Cao, F Ge… - Plant …, 2024 - academic.oup.com
Lysine acetylation is a conserved regulatory posttranslational protein modification that is
performed by lysine acetyltransferases (KATs). By catalyzing the transfer of acetyl groups to …
performed by lysine acetyltransferases (KATs). By catalyzing the transfer of acetyl groups to …
DEP2: an upgraded comprehensive analysis toolkit for quantitative proteomics data
Z Feng, P Fang, H Zheng, X Zhang - Bioinformatics, 2023 - academic.oup.com
Mass spectrometry (MS)-based proteomics has become the most powerful approach to
study the proteome of given biological and clinical samples. Advancements in sample …
study the proteome of given biological and clinical samples. Advancements in sample …
Tidyproteomics: an open-source R package and data object for quantitative proteomics post analysis and visualization
Background The analysis of mass spectrometry-based quantitative proteomics data can be
challenging given the variety of established analysis platforms, the differences in reporting …
challenging given the variety of established analysis platforms, the differences in reporting …
Multi-Omic analysis of two common P53 mutations: proteins regulated by mutated P53 as potential targets for immunotherapy
Simple Summary TP53 is the most frequently mutated gene in many cancers, but it has
failed to be a very effective target for treatment to date. To overcome this, we have examined …
failed to be a very effective target for treatment to date. To overcome this, we have examined …
Mass‐Guided Single‐Cell MALDI Imaging of Low‐Mass Metabolites Reveals Cellular Activation Markers
JL Cairns, J Huber, A Lewen, J Jung… - Advanced …, 2024 - Wiley Online Library
Single‐cell MALDI mass spectrometry imaging (MSI) of lipids and metabolites> 200 Da has
recently come to the forefront of biomedical research and chemical biology. However, cell …
recently come to the forefront of biomedical research and chemical biology. However, cell …
[HTML][HTML] Dynamic Multiple Reaction Monitoring of amphipod Gammarus fossarum caeca expands molecular information for understanding the impact of contaminants
M Leprêtre, A Chaumot, R Aboud, N Delorme… - Science of the Total …, 2023 - Elsevier
Mass spectrometry in multiple reaction monitoring (MRM) mode is a powerful technique that
can provide highly selective, multiplexed, and reproducible quantification of peptides …
can provide highly selective, multiplexed, and reproducible quantification of peptides …
Paternal undernutrition and overnutrition modify semen composition and preimplantation embryo developmental kinetics in mice
Background The importance of parental diet in relation to eventual offspring health is
increasing in prominence due to the increased frequency of parents of reproductive age …
increasing in prominence due to the increased frequency of parents of reproductive age …
Investigation on acquired palbociclib resistance by LC-MS based multi-omics analysis
Z Xue, J Zeng, X Yin, Y Li, B Meng, Y Zhao… - Frontiers in Molecular …, 2023 - frontiersin.org
Palbociclib is a specific CDK4/6 inhibitor that has been widely applied in multiple types of
tumors. Different from cytotoxic drugs, the anticancer mechanism of palbociclib mainly …
tumors. Different from cytotoxic drugs, the anticancer mechanism of palbociclib mainly …