MAPK/ERK pathway as a central regulator in vertebrate organ regeneration

X Wen, L Jiao, H Tan - International journal of molecular sciences, 2022 - mdpi.com
Damage to organs by trauma, infection, diseases, congenital defects, aging, and other
injuries causes organ malfunction and is life-threatening under serious conditions. Some of …

[HTML][HTML] Signalling dynamics, cell decisions, and homeostatic control in health and disease

PO Valls, A Esposito - Current Opinion in Cell Biology, 2022 - Elsevier
Cell signalling engenders cells with the capability to receive and process information from
the intracellular and extracellular environments, trigger and execute biological responses …

Time‐series transcriptomics and proteomics reveal alternative modes to decode p53 oscillations

A Jiménez, D Lu, M Kalocsay, MJ Berberich… - Molecular systems …, 2022 - embopress.org
The cell stress‐responsive transcription factor p53 influences the expression of its target
genes and subsequent cellular responses based in part on its dynamics (changes in level …

PlotTwist: A web app for plotting and annotating continuous data

J Goedhart - PLoS biology, 2020 - journals.plos.org
Experimental data can broadly be divided in discrete or continuous data. Continuous data
are obtained from measurements that are performed as a function of another quantitative …

Optogenetic actuator–ERK biosensor circuits identify MAPK network nodes that shape ERK dynamics

C Dessauges, J Mikelson, M Dobrzyński… - Molecular systems …, 2022 - embopress.org
Combining single‐cell measurements of ERK activity dynamics with perturbations provides
insights into the MAPK network topology. We built circuits consisting of an optogenetic …

High-throughput injection molded microfluidic device for single-cell analysis of spatiotemporal dynamics

Y Kim, J Song, Y Lee, S Cho, S Kim, SR Lee, S Park… - Lab on a Chip, 2021 - pubs.rsc.org
Single-cell level analysis of various cellular behaviors has been aided by recent
developments in microfluidic technology. Polydimethylsiloxane (PDMS)-based microfluidic …

Single-cell imaging of ERK and Akt activation dynamics and heterogeneity induced by G-protein-coupled receptors

S Chavez-Abiega, MLB Grönloh… - Journal of cell …, 2022 - journals.biologists.com
Kinases play key roles in signaling networks that are activated by G-protein-coupled
receptors (GPCRs). Kinase activities are generally inferred from cell lysates, hiding cell-to …

Identification of cell type–specific correlations between ERK activity and cell viability upon treatment with ERK1/2 inhibitors

TD Lebedev, ER Khabusheva, SR Mareeva… - Journal of Biological …, 2022 - ASBMB
Increased MAPK signaling is a hallmark of various cancers and is a central regulator of cell
survival. Direct ERK1/2 inhibition is considered a promising approach to avoid ERK1/2 …

Processing temporal growth factor patterns by an epidermal growth factor receptor network dynamically established in space

A Koseska, PIH Bastiaens - Annual Review of Cell and …, 2020 - annualreviews.org
The proto-oncogenic epidermal growth factor (EGF) receptor (EGFR) is a tyrosine kinase
whose sensitivity and response to growth factor signals that vary over time and space …

Cytokine combinations for human blood stem cell expansion induce cell-type–and cytokine-specific signaling dynamics

W Wang, Y Zhang, P Dettinger… - Blood, The Journal …, 2021 - ashpublications.org
How hematopoietic stem cells (HSCs) integrate signals from their environment to make fate
decisions remains incompletely understood. Current knowledge is based on either averages …