New developments in RiPP discovery, enzymology and engineering
M Montalbán-López, TA Scott, S Ramesh… - Natural product …, 2021 - pubs.rsc.org
Covering: up to June 2020 Ribosomally-synthesized and post-translationally modified
peptides (RiPPs) are a large group of natural products. A community-driven review in 2013 …
peptides (RiPPs) are a large group of natural products. A community-driven review in 2013 …
Genome mining as new challenge in natural products discovery
Drug discovery is based on bioactivity screening of natural sources, traditionally represented
by bacteria fungi and plants. Bioactive natural products and their secondary metabolites …
by bacteria fungi and plants. Bioactive natural products and their secondary metabolites …
The IMG/M data management and analysis system v. 7: content updates and new features
IMA Chen, K Chu, K Palaniappan, A Ratner… - Nucleic acids …, 2023 - academic.oup.com
Abstract The Integrated Microbial Genomes & Microbiomes system (IMG/M: https://img. jgi.
doe. gov/m/) at the Department of Energy (DOE) Joint Genome Institute (JGI) continues to …
doe. gov/m/) at the Department of Energy (DOE) Joint Genome Institute (JGI) continues to …
The IMG/M data management and analysis system v. 6.0: new tools and advanced capabilities
IMA Chen, K Chu, K Palaniappan, A Ratner… - Nucleic acids …, 2021 - academic.oup.com
Abstract The Integrated Microbial Genomes & Microbiomes system (IMG/M: https://img. jgi.
doe. gov/m/) contains annotated isolate genome and metagenome datasets sequenced at …
doe. gov/m/) contains annotated isolate genome and metagenome datasets sequenced at …
MIBiG 2.0: a repository for biosynthetic gene clusters of known function
SA Kautsar, K Blin, S Shaw… - Nucleic acids …, 2020 - academic.oup.com
Fueled by the explosion of (meta) genomic data, genome mining of specialized metabolites
has become a major technology for drug discovery and studying microbiome ecology. In …
has become a major technology for drug discovery and studying microbiome ecology. In …
IMG/M v. 5.0: an integrated data management and comparative analysis system for microbial genomes and microbiomes
IMA Chen, K Chu, K Palaniappan, M Pillay… - Nucleic acids …, 2019 - academic.oup.com
Abstract The Integrated Microbial Genomes & Microbiomes system v. 5.0 (IMG/M: https://img.
jgi. doe. gov/m/) contains annotated datasets categorized into: archaea, bacteria, eukarya …
jgi. doe. gov/m/) contains annotated datasets categorized into: archaea, bacteria, eukarya …
Fungal secondary metabolites in food and pharmaceuticals in the era of multi-omics
Fungi produce several bioactive metabolites, pigments, dyes, antioxidants, polysaccharides,
and industrial enzymes. Fungal products are also the primary sources of functional food and …
and industrial enzymes. Fungal products are also the primary sources of functional food and …
Microbial chassis development for natural product biosynthesis
X Xu, Y Liu, G Du, R Ledesma-Amaro, L Liu - Trends in biotechnology, 2020 - cell.com
Engineering microbial cells to efficiently synthesize high-value-added natural products has
received increasing attention in recent years. In this review, we describe the pipeline to build …
received increasing attention in recent years. In this review, we describe the pipeline to build …
[HTML][HTML] Antibiotic resistance: Global health crisis and metagenomics
S Yadav, A Kapley - Biotechnology Reports, 2021 - Elsevier
Antibiotic resistance is a global problem which affects human health. The imprudent use of
antibiotics (medicine, agriculture, aquaculture, and food industry) has resulted in the broader …
antibiotics (medicine, agriculture, aquaculture, and food industry) has resulted in the broader …
IMG-ABC v. 5.0: an update to the IMG/Atlas of Biosynthetic Gene Clusters Knowledgebase
K Palaniappan, IMA Chen, K Chu, A Ratner… - Nucleic acids …, 2020 - academic.oup.com
Microbial secondary metabolism is a reservoir of bioactive compounds of immense
biotechnological and biomedical potential. The biosynthetic machinery responsible for the …
biotechnological and biomedical potential. The biosynthetic machinery responsible for the …