A view of the pan‐genome of domesticated Cowpea (Vigna unguiculata [L.] Walp.)

Q Liang, M Muñoz‐Amatriaín, S Shu, S Lo… - The Plant …, 2024 - Wiley Online Library
Abstract Cowpea, Vigna unguiculata L. Walp., is a diploid warm‐season legume of critical
importance as both food and fodder in sub‐Saharan Africa. This species is also grown in …

Large haplotypes highlight a complex age structure within the maize pan-genome

J Liu, RK Dawe - Genome Research, 2023 - genome.cshlp.org
The genomes of maize and other eukaryotes contain stable haplotypes in regions of low
recombination. These regions, including centromeres, long heterochromatic blocks, and …

Using genome scans to identify genes used repeatedly for adaptation

TR Booker, S Yeaman, MC Whitlock - Evolution, 2023 - academic.oup.com
Adaptation occurring in similar genes or genomic regions in distinct lineages provides
evolutionary biologists with a glimpse at the fundamental opportunities for and constraints to …

Diamonds in the not-so-rough: Wild relative diversity hidden in crop genomes

S Flint-Garcia, MJ Feldmann, H Dempewolf… - PLoS …, 2023 - journals.plos.org
Crop production is becoming an increasing challenge as the global population grows and
the climate changes. Modern cultivated crop species are selected for productivity under …

Repeatability of adaptation in sunflowers reveals that genomic regions harbouring inversions also drive adaptation in species lacking an inversion

S Soudi, M Jahani, M Todesco, GL Owens, N Bercovich… - Elife, 2023 - elifesciences.org
Local adaptation commonly involves alleles of large effect, which experience fitness
advantages when in positive linkage disequilibrium (LD). Because segregating inversions …

Impacts of pleiotropy and migration on repeated genetic adaptation

P Battlay, S Yeaman, KA Hodgins - Genetics, 2024 - academic.oup.com
Observations of genetically repeated evolution (repeatability) in complex organisms are
incongruent with the Fisher–Orr model, which implies that repeated use of the same gene …

Local selection shaped the diversity of European maize landraces

M Takou, K Schulz, MG Stetter - bioRxiv, 2024 - biorxiv.org
The introduction of populations to novel environments can lead to a loss of genetic diversity
and the accumulation of deleterious mutations due to selection and demographic changes …

[PDF][PDF] Pleiotropy drives repeatability in the genetic basis of adaptation

P Battlay, S Yeaman, KA Hodgins - bioRxiv, 2021 - biorxiv.org
Studies of trait-mapping and local adaptation often identify signatures of genetically parallel
evolution, where different species evolve similar phenotypes using the same genes. Such …

Genomic Consequences of the Evolutionary Loss of Sexual Reproduction in the Evening Primrose Genus Oenothera

D Carlson - 2022 - search.proquest.com
Questions regarding the origin and maintenance of sexual reproduction are of abiding
interest to biologists. Both theory and empirical data suggest that homologous …