Development of a CRISPR-Cas9 tool kit for comprehensive engineering of Bacillus subtilis

AW Westbrook, M Moo-Young… - Applied and …, 2016 - Am Soc Microbiol
The establishment of a clustered regularly interspaced short palindromic repeat (CRISPR)-
Cas9 system for strain construction in Bacillus subtilis is essential for its progression toward …

Efficient and Scalable Precision Genome Editing in Staphylococcus aureus through Conditional Recombineering and CRISPR/Cas9-Mediated Counterselection

K Penewit, EA Holmes, K McLean, M Ren, A Waalkes… - MBio, 2018 - Am Soc Microbiol
Staphylococcus aureus is an important human pathogen, but studies of the organism have
suffered from the lack of a robust tool set for its genetic and genomic manipulation. Here we …

[HTML][HTML] Advances in accurate microbial genome-editing CRISPR technologies

HJ Lee, SJ Lee - Journal of Microbiology and Biotechnology, 2021 - ncbi.nlm.nih.gov
Previous studies have modified microbial genomes by introducing gene cassettes
containing selectable markers and homologous DNA fragments. However, this requires …

RNA polymerase drives ribonucleotide excision DNA repair in E. coli

Z Hao, M Gowder, S Proshkin, BK Bharati, V Epshtein… - Cell, 2023 - cell.com
Ribonuclease HII (RNaseHII) is the principal enzyme that removes misincorporated
ribonucleoside monophosphates (rNMPs) from genomic DNA. Here, we present structural …

LamB, OmpC, and the core lipopolysaccharide of Escherichia coli K-12 function as receptors of bacteriophage Bp7

P Chen, H Sun, H Ren, W Liu, G Li, C Zhang - Journal of Virology, 2020 - Am Soc Microbiol
Bp7 is a T-even phage with a broad host range specific to Escherichia coli, including E. coli
K-12. The receptor binding protein (RBP) of bacteriophages plays an important role in the …

Portable CRISPR-Cas9N System for Flexible Genome Engineering in Lactobacillus acidophilus, Lactobacillus gasseri, and Lactobacillus paracasei

YJ Goh, R Barrangou - Applied and Environmental Microbiology, 2021 - Am Soc Microbiol
Diverse Lactobacillus strains are widely used as probiotic cultures in the dairy and dietary
supplement industries, and specific strains, such as Lactobacillus acidophilus NCFM, have …

A new suite of allelic-exchange vectors for the scarless modification of proteobacterial genomes

JE Lazarus, AR Warr, CJ Kuehl… - Applied and …, 2019 - Am Soc Microbiol
Despite the advent of new techniques for genetic engineering of bacteria, allelic exchange
through homologous recombination remains an important tool for genetic analysis …

CsrA-Mediated Translational Activation of ymdA Expression in Escherichia coli

A Renda, S Poly, YJ Lai, A Pannuri, H Yakhnin… - Mbio, 2020 - Am Soc Microbiol
The sequence-specific RNA-binding protein CsrA is the central component of the conserved
global regulatory Csr system. In Escherichia coli, CsrA regulates many cellular processes …

Hybrid Exb/Mot stators require substitutions distant from the chimeric pore to power flagellar rotation

P Ridone, MAB Baker - Journal of Bacteriology, 2024 - journals.asm.org
Powered by ion transport across the cell membrane, conserved ion-powered rotary motors
(IRMs) drive bacterial motility by generating torque on the rotor of the bacterial flagellar …

[PDF][PDF] A MAD7‐based genome editing system for Escherichia coli

M Mund, W Weber, D Degreif… - Microbial …, 2023 - Wiley Online Library
A broad variety of biomolecules is industrially produced in bacteria and yeasts. These
microbial expression hosts can be optimized through genetic engineering using CRISPR …