SNP discovery through next-generation sequencing and its applications

S Kumar, TW Banks, S Cloutier - Crop Breeding, 2016 - taylorfrancis.com
Molecular markers are widely used in plant genetic research and breeding. Single
Nucleotide Polymorphisms (SNPs) are currently the marker of choice due to their large …

Application of SNPs for population genetics of nonmodel organisms: new opportunities and challenges

SJ Helyar, J Hemmer‐Hansen… - Molecular ecology …, 2011 - Wiley Online Library
Recent improvements in the speed, cost and accuracy of next generation sequencing are
revolutionizing the discovery of single nucleotide polymorphisms (SNPs). SNPs are …

[图书][B] Animal social networks

J Krause, R James, DW Franks, DP Croft - 2015 - books.google.com
The scientific study of networks-computer, social, and biological-has received an enormous
amount of interest in recent years. However, the network approach has been applied to the …

Single-nucleotide polymorphism (SNP) discovery and applications of SNP genotyping in nonmodel organisms.

JE Seeb, G Carvalho, L Hauser… - Molecular ecology …, 2011 - search.ebscohost.com
An introduction to articles published within the issue is presented, including an approach to
discover single-nucleotide polymorphisms (SNP) for population genetics study of the ringed …

A review of the application of molecular genetics for fisheries management and conservation of sharks and rays

CL Dudgeon, DC Blower, D Broderick… - Journal of fish …, 2012 - Wiley Online Library
Since the first investigation 25 years ago, the application of genetic tools to address
ecological and evolutionary questions in elasmobranch studies has greatly expanded. Major …

A nuclear phylogenetic analysis: SNPs, indels and SSRs deliver new insights into the relationships in the 'true citrus fruit trees' group (Citrinae, Rutaceae) and the …

A Garcia-Lor, F Curk, H Snoussi-Trifa… - Annals of …, 2013 - academic.oup.com
Abstract Background and Aims Despite differences in morphology, the genera representing
'true citrus fruit trees' are sexually compatible, and their phylogenetic relationships remain …

Development and applications of a high throughput genotyping tool for polyploid crops: single nucleotide polymorphism (SNP) array

Q You, X Yang, Z Peng, L Xu, J Wang - Frontiers in Plant Science, 2018 - frontiersin.org
Polypoid species play significant roles in agriculture and food production. Many crop
species are polyploid, such as potato, wheat, strawberry, and sugarcane. Genotyping has …

A flexible multi‐species genome‐wide 60K SNP chip developed from pooled resequencing of 240 Eucalyptus tree genomes across 12 species

OB Silva‐Junior, DA Faria, D Grattapaglia - New Phytologist, 2015 - Wiley Online Library
We used whole genome resequencing of pooled individuals to develop a high‐density
single‐nucleotide polymorphism (SNP) chip for Eucalyptus. Genomes of 240 trees of 12 …

Double‐digest RAD sequencing outperforms microsatellite loci at assigning paternity and estimating relatedness: A proof of concept in a highly promiscuous bird

DJ Thrasher, BG Butcher, L Campagna… - Molecular Ecology …, 2018 - Wiley Online Library
Abstract Information on genetic relationships among individuals is essential to many studies
of the behaviour and ecology of wild organisms. Parentage and relatedness assays based …

Applying genomic data in wildlife monitoring: Development guidelines for genotyping degraded samples with reduced single nucleotide polymorphism panels

A von Thaden, C Nowak, A Tiesmeyer… - Molecular ecology …, 2020 - Wiley Online Library
The genomic era has led to an unprecedented increase in the availability of genome‐wide
data for a broad range of taxa. Wildlife management strives to make use of these vast …