Improving industrial yeast strains: exploiting natural and artificial diversity
J Steensels, T Snoek, E Meersman… - FEMS microbiology …, 2014 - academic.oup.com
Yeasts have been used for thousands of years to make fermented foods and beverages,
such as beer, wine, sake, and bread. However, the choice for a particular yeast strain or …
such as beer, wine, sake, and bread. However, the choice for a particular yeast strain or …
The evolution of sex: a perspective from the fungal kingdom
SC Lee, M Ni, W Li, C Shertz… - … and molecular biology …, 2010 - Am Soc Microbiol
Sex is shrouded in mystery. Not only does it preferentially occur in the dark for both fungi
and many animals, but evolutionary biologists continue to debate its benefits given costs in …
and many animals, but evolutionary biologists continue to debate its benefits given costs in …
Genome evolution across 1,011 Saccharomyces cerevisiae isolates
J Peter, M De Chiara, A Friedrich, JX Yue, D Pflieger… - Nature, 2018 - nature.com
Large-scale population genomic surveys are essential to explore the phenotypic diversity of
natural populations. Here we report the whole-genome sequencing and phenotyping of …
natural populations. Here we report the whole-genome sequencing and phenotyping of …
Breaking RAD: An evaluation of the utility of restriction site‐associated DNA sequencing for genome scans of adaptation
Understanding how and why populations evolve is of fundamental importance to molecular
ecology. Restriction site‐associated DNA sequencing (RAD seq), a popular reduced …
ecology. Restriction site‐associated DNA sequencing (RAD seq), a popular reduced …
Adaptation of S. cerevisiae to Fermented Food Environments Reveals Remarkable Genome Plasticity and the Footprints of Domestication
The budding yeast Saccharomyces cerevisiae can be found in the wild and is also
frequently associated with human activities. Despite recent insights into the phylogeny of this …
frequently associated with human activities. Despite recent insights into the phylogeny of this …
Population genomics of domestic and wild yeasts
Since the completion of the genome sequence of Saccharomyces cerevisiae in 1996 (refs),
there has been a large increase in complete genome sequences, accompanied by great …
there has been a large increase in complete genome sequences, accompanied by great …
Regulatory activity is the default DNA state in eukaryotes
I Luthra, C Jensen, XE Chen, AL Salaudeen… - Nature Structural & …, 2024 - nature.com
Genomes encode for genes and non-coding DNA, both capable of transcriptional activity.
However, unlike canonical genes, many transcripts from non-coding DNA have limited …
However, unlike canonical genes, many transcripts from non-coding DNA have limited …
A high-definition view of functional genetic variation from natural yeast genomes
The question of how genetic variation in a population influences phenotypic variation and
evolution is of major importance in modern biology. Yet much is still unknown about the …
evolution is of major importance in modern biology. Yet much is still unknown about the …
Surprisingly diverged populations of Saccharomyces cerevisiae in natural environments remote from human activity
The budding yeast, S accharomyces cerevisiae, is a leading system in genetics, genomics
and molecular biology and is becoming a powerful tool to illuminate ecological and …
and molecular biology and is becoming a powerful tool to illuminate ecological and …
Trait variation in yeast is defined by population history
A fundamental goal in biology is to achieve a mechanistic understanding of how and to what
extent ecological variation imposes selection for distinct traits and favors the fixation of …
extent ecological variation imposes selection for distinct traits and favors the fixation of …