Connecting connectomes to physiology

A Borst, C Leibold - Journal of Neuroscience, 2023 - Soc Neuroscience
With the advent of volumetric EM techniques, large connectomic datasets are being created,
providing neuroscience researchers with knowledge about the full connectivity of neural …

Relating network connectivity to dynamics: opportunities and challenges for theoretical neuroscience

C Curto, K Morrison - Current opinion in neurobiology, 2019 - Elsevier
Highlights•Relating network connectivity to dynamics poses a serious theoretical
challenge.•Network science concepts may have limited relevance in a neuroscience …

Republished: Dynamics of stochastic integrate-and-fire networks

GK Ocker - Physical Review X, 2023 - APS
The neural dynamics generating sensory, motor, and cognitive functions are commonly
understood through field theories for neural population activity. Classic neural field theories …

Sequential attractors in combinatorial threshold-linear networks

C Parmelee, JL Alvarez, C Curto, K Morrison - SIAM journal on applied …, 2022 - SIAM
Sequences of neural activity arise in many brain areas, including cortex, hippocampus, and
central pattern generator circuits that underlie rhythmic behaviors like locomotion. While …

Inferring stochastic low-rank recurrent neural networks from neural data

M Pals, AE Sağtekin, F Pei, M Gloeckler… - arXiv preprint arXiv …, 2024 - arxiv.org
A central aim in computational neuroscience is to relate the activity of large populations of
neurons to an underlying dynamical system. Models of these neural dynamics should ideally …

Geometric framework to predict structure from function in neural networks

T Biswas, JE Fitzgerald - Physical review research, 2022 - APS
This article is part of the Physical Review Research collection titled Physics of
Neuroscience. Neural computation in biological and artificial networks relies on the …

[HTML][HTML] Core motifs predict dynamic attractors in combinatorial threshold-linear networks

C Parmelee, S Moore, K Morrison, C Curto - PloS one, 2022 - journals.plos.org
Combinatorial threshold-linear networks (CTLNs) are a special class of inhibition-dominated
TLNs defined from directed graphs. Like more general TLNs, they display a wide variety of …

[HTML][HTML] Nonlinear stimulus representations in neural circuits with approximate excitatory-inhibitory balance

C Baker, V Zhu, R Rosenbaum - PLoS computational biology, 2020 - journals.plos.org
Balanced excitation and inhibition is widely observed in cortex. How does this balance
shape neural computations and stimulus representations? This question is often studied …

Constraining computational models using electron microscopy wiring diagrams

A Litwin-Kumar, SC Turaga - Current opinion in neurobiology, 2019 - Elsevier
Highlights•Numerous mapping efforts are generating electron-microscopy wiring diagrams
of neural circuits or entire brains.•Detailed connectivity data are now being used in the …

Optimal network interventions to control the spreading of oscillations

A Allibhoy, F Celi, F Pasqualetti… - IEEE Open Journal of …, 2022 - ieeexplore.ieee.org
Oscillations are a prominent feature of neuronal activity and are associated with a variety of
phenomena in brain tissue, both healthy and unhealthy. Characterizing how oscillations …