Caveat fluorophore: an insiders' guide to small-molecule fluorescent labels

JB Grimm, LD Lavis - Nature Methods, 2022 - nature.com
The last three decades have brought a revolution in fluorescence microscopy. The
development of new microscopes, fluorescent labels and analysis techniques has pushed …

Strain-promoted 1, 3-dipolar cycloaddition of cycloalkynes and organic azides

J Dommerholt, FPJT Rutjes, FL van Delft - Cycloadditions in Bioorthogonal …, 2016 - Springer
A nearly forgotten reaction discovered more than 60 years ago—the cycloaddition of a cyclic
alkyne and an organic azide, leading to an aromatic triazole—enjoys a remarkable …

Design strategies for bioorthogonal smart probes

P Shieh, CR Bertozzi - Organic & biomolecular chemistry, 2014 - pubs.rsc.org
Bioorthogonal chemistry has enabled the selective labeling and detection of biomolecules in
living systems. Bioorthogonal smart probes, which become fluorescent or deliver imaging or …

Labeling proteins on live mammalian cells using click chemistry

I Nikić, JH Kang, GE Girona, IV Aramburu, EA Lemke - Nature protocols, 2015 - nature.com
We describe a protocol for the rapid labeling of cell-surface proteins in living mammalian
cells using click chemistry. The labeling method is based on strain-promoted alkyne-azide …

Bioorthogonal double-fluorogenic siliconrhodamine probes for intracellular super-resolution microscopy

E Kozma, GE Girona, G Paci, EA Lemke… - Chemical …, 2017 - pubs.rsc.org
A series of double-fluorogenic siliconrhodamine probes were synthesized. These tetrazine-
functionalized, membrane-permeable labels allowed site-specific bioorthogonal tagging of …

Solvatochromic fluorescent styryl pyrene probes for the quantitative determination of water content in organic solvents

M Noikham, C Sriwiphasathit, K Siriwong, T Vilaivan - Dyes and Pigments, 2023 - Elsevier
A series of D-π-A fluorescent styryl pyrene probes were synthesized through the Wittig
reaction. The introduction of an electron-withdrawing substituent on the phenyl ring creates …

[HTML][HTML] Genetic code expansion enabled site-specific dual-color protein labeling: superresolution microscopy and beyond

I Nikić, EA Lemke - Current opinion in chemical biology, 2015 - Elsevier
Highlights•Multiple noncanonical amino acids (ncAAs) can be incorporated site-specifically
into target proteins.•Clickable ncAAs can be used to attach small dyes directly to the target …

New Red‐Emitting Tetrazine‐Phenoxazine Fluorogenic Labels for Live‐Cell Intracellular Bioorthogonal Labeling Schemes

G Knorr, E Kozma, A Herner… - … –A European Journal, 2016 - Wiley Online Library
The synthesis of a set of tetrazine‐bearing fluorogenic dyes suitable for intracellular labeling
of proteins in live cells is presented. The red excitability and emission properties ensure …

Bioorthogonally applicable fluorogenic cyanine-tetrazines for no-wash super-resolution imaging

G Knorr, E Kozma, JM Schaart, K Németh… - Bioconjugate …, 2018 - ACS Publications
The synthesis, fluorogenic characterization, and labeling application of four tetrazine-
quenched cyanine probes with emission maxima in the red–far red range is reported …

Bioorthogonal fluorescent labels: a review on combined forces

GB Cserép, A Herner, P Kele - Methods and applications in …, 2015 - iopscience.iop.org
This review ventures to summarize the latest developments in bioorthogonal fluorescent
imaging labels with a special focus on bioimaging applications. We briefly summarize the …