Intracellular transport driven by cytoskeletal motors: General mechanisms and defects
C Appert-Rolland, M Ebbinghaus, L Santen - Physics Reports, 2015 - Elsevier
Cells are the elementary units of living organisms, which are able to carry out many vital
functions. These functions rely on active processes on a microscopic scale. Therefore, they …
functions. These functions rely on active processes on a microscopic scale. Therefore, they …
Non-equilibrium statistical mechanics: from a paradigmatic model to biological transport
Unlike equilibrium statistical mechanics, with its well-established foundations, a similar
widely accepted framework for non-equilibrium statistical mechanics (NESM) remains …
widely accepted framework for non-equilibrium statistical mechanics (NESM) remains …
Totally asymmetric exclusion process with site-wise dynamic disorder
B Waclaw, J Cholewa-Waclaw… - Journal of Physics A …, 2019 - iopscience.iop.org
We propose an extension of the totally asymmetric simple exclusion process (TASEP) in
which particles hopping along a lattice can be blocked by obstacles that dynamically …
which particles hopping along a lattice can be blocked by obstacles that dynamically …
Marching on a rugged landscape: Universality in disordered asymmetric exclusion processes
A Haldar, A Basu - Physical Review Research, 2020 - APS
We develop the hydrodynamic theory for number conserving asymmetric exclusion
processes with short-range random quenched disordered hopping rates, which is a one …
processes with short-range random quenched disordered hopping rates, which is a one …
Defect-induced phase transition in the asymmetric simple exclusion process
J Schmidt, V Popkov, A Schadschneider - Europhysics Letters, 2015 - iopscience.iop.org
We reconsider the long-standing question of the critical defect hopping rate rc in the one-
dimensional totally asymmetric exclusion process (TASEP) with a slow bond (defect). For r< …
dimensional totally asymmetric exclusion process (TASEP) with a slow bond (defect). For r< …
Entrainment and unit velocity: Surprises in an accelerated exclusion process
We introduce a class of distance-dependent interactions in an accelerated exclusion
process inspired by the observation of transcribing RNA polymerase speeding up when …
process inspired by the observation of transcribing RNA polymerase speeding up when …
Unbalanced Langmuir kinetics affects TASEP dynamical transitions: mean-field theory
D Botto, A Pelizzola, M Pretti… - Journal of Physics A …, 2020 - iopscience.iop.org
In a previous study we developed a mean-field theory of dynamical transitions for the totally-
asymmetric simple-exclusion process with open boundaries and Langmuir kinetics, in the so …
asymmetric simple-exclusion process with open boundaries and Langmuir kinetics, in the so …
[HTML][HTML] Totally asymmetric simple exclusion process on a dynamic lattice with local inhomogeneity
C Lin, Y Huang, Z Xu, Y Zhang - Results in Physics, 2024 - Elsevier
In this manuscript, we introduce a totally asymmetric simple exclusion process on a dynamic
lattice with inhomogeneity to model motor-based long-range transport along microtubules …
lattice with inhomogeneity to model motor-based long-range transport along microtubules …
Exact stationary distribution of an asymmetric simple exclusion process with Langmuir kinetics and memory reservoirs
T Ezaki, K Nishinari - Journal of Physics A: Mathematical and …, 2012 - iopscience.iop.org
We present exact stationary distribution of the asymmetric simple exclusion process with
Langmuir kinetics and its related model on a ring. The distribution is expressed in simple …
Langmuir kinetics and its related model on a ring. The distribution is expressed in simple …
Totally asymmetric simple exclusion process with langmuir kinetics depending on the occupancy of the neighboring sites
We generalize the totally asymmetric simple exclusion process with Langmuir kinetics
(TASEP-LK). In the original TASEP-LK, when a site on the lattice is empty, a particle is …
(TASEP-LK). In the original TASEP-LK, when a site on the lattice is empty, a particle is …