The MHC locus and genetic susceptibility to autoimmune and infectious diseases

V Matzaraki, V Kumar, C Wijmenga, A Zhernakova - Genome biology, 2017 - Springer
In the past 50 years, variants in the major histocompatibility complex (MHC) locus, also
known as the human leukocyte antigen (HLA), have been reported as major risk factors for …

Complex genetic signatures in immune cells underlie autoimmunity and inform therapy

V Orrù, M Steri, C Sidore, M Marongiu, V Serra, S Olla… - Nature …, 2020 - nature.com
We report on the influence of~ 22 million variants on 731 immune cell traits in a cohort of
3,757 Sardinians. We detected 122 significant (P< 1.28× 10− 11) independent association …

Host genetic determinants of hepatitis B virus infection

Z Zhang, C Wang, Z Liu, G Zou, J Li, M Lu - Frontiers in genetics, 2019 - frontiersin.org
Chronic hepatitis B virus (HBV) infection is still a major health problem worldwide. Recently,
a great number of genetic studies based on single nucleotide polymorphisms (SNPs) and …

Deep learning sequence-based ab initio prediction of variant effects on expression and disease risk

J Zhou, CL Theesfeld, K Yao, KM Chen, AK Wong… - Nature …, 2018 - nature.com
Key challenges for human genetics, precision medicine and evolutionary biology include
deciphering the regulatory code of gene expression and understanding the transcriptional …

Mapping of 79 loci for 83 plasma protein biomarkers in cardiovascular disease

L Folkersen, E Fauman, M Sabater-Lleal… - PLoS …, 2017 - journals.plos.org
Recent advances in highly multiplexed immunoassays have allowed systematic large-scale
measurement of hundreds of plasma proteins in large cohort studies. In combination with …

Detecting long-term balancing selection using allele frequency correlation

KM Siewert, BF Voight - Molecular biology and evolution, 2017 - academic.oup.com
Balancing selection occurs when multiple alleles are maintained in a population, which can
result in their preservation over long evolutionary time periods. A characteristic signature of …

Signatures of long-term balancing selection in human genomes

BD Bitarello, C De Filippo, JC Teixeira… - Genome biology and …, 2018 - academic.oup.com
Balancing selection maintains advantageous diversity in populations through various
mechanisms. Although extensively explored from a theoretical perspective, an empirical …

A review of HLA allele and SNP associations with highly prevalent infectious diseases in human populations

A Sanchez-Mazas - Swiss medical weekly, 2020 - smw.ch
Human leucocyte antigen (HLA) alleles and single nucleotide polymorphisms (SNPs) lying
in the HLA region are known to be associated with several infectious diseases among which …

Current HLA investigations on SARS-CoV-2 and perspectives

V Douillard, EC Castelli, SJ Mack, JA Hollenbach… - Frontiers in …, 2021 - frontiersin.org
The rapid, global spread of the SARS-CoV-2 virus during the current pandemic has
triggered numerous efforts in clinical and research settings to better understand the host …

Genetic susceptibility to infectious diseases: Current status and future perspectives from genome-wide approaches

A Mozzi, C Pontremoli, M Sironi - Infection, genetics and evolution, 2018 - Elsevier
Genome-wide association studies (GWASs) have been widely applied to identify genetic
factors that affect complex diseases or traits. Presently, the GWAS Catalog includes> 2800 …