Twenty years of plant genome sequencing: achievements and challenges

Y Sun, L Shang, QH Zhu, L Fan, L Guo - Trends in Plant Science, 2022 - cell.com
Publication of the complete genome sequence of Arabidopsis thaliana, the first plant
reference genome, in December 2000 heralded the beginning of the plant genome era …

Plant evolution driven by interactions with symbiotic and pathogenic microbes

PM Delaux, S Schornack - Science, 2021 - science.org
BACKGROUND Microbial interactions have shaped plant diversity in terrestrial ecosystems.
By forming mutually beneficial symbioses, microbes helped plants colonize land more than …

One thousand plant transcriptomes and the phylogenomics of green plants

Nature, 2019 - nature.com
Green plants (Viridiplantae) include around 450,000–500,000 species, of great diversity and
have important roles in terrestrial and aquatic ecosystems. Here, as part of the One …

Ethylene signaling in plants

BM Binder - Journal of Biological Chemistry, 2020 - ASBMB
Ethylene is a gaseous phytohormone and the first of this hormone class to be discovered. It
is the simplest olefin gas and is biosynthesized by plants to regulate plant development …

Insights into land plant evolution garnered from the Marchantia polymorpha genome

JL Bowman, T Kohchi, KT Yamato, J Jenkins, S Shu… - Cell, 2017 - cell.com
The evolution of land flora transformed the terrestrial environment. Land plants evolved from
an ancestral charophycean alga from which they inherited developmental, biochemical, and …

Genome sequence of Gossypium herbaceum and genome updates of Gossypium arboreum and Gossypium hirsutum provide insights into cotton A-genome …

G Huang, Z Wu, RG Percy, M Bai, Y Li… - Nature …, 2020 - nature.com
Upon assembling the first Gossypium herbaceum (A1) genome and substantially improving
the existing Gossypium arboreum (A2) and Gossypium hirsutum ((AD) 1) genomes, we …

The Taxus genome provides insights into paclitaxel biosynthesis

X Xiong, J Gou, Q Liao, Y Li, Q Zhou, G Bi, C Li, R Du… - Nature Plants, 2021 - nature.com
The ancient gymnosperm genus Taxus is the exclusive source of the anticancer drug
paclitaxel, yet no reference genome sequences are available for comprehensively …

Fern genomes elucidate land plant evolution and cyanobacterial symbioses

FW Li, P Brouwer, L Carretero-Paulet, S Cheng… - Nature plants, 2018 - nature.com
Ferns are the closest sister group to all seed plants, yet little is known about their genomes
other than that they are generally colossal. Here, we report on the genomes of Azolla …

Gene duplication and evolution in recurring polyploidization–diploidization cycles in plants

X Qiao, Q Li, H Yin, K Qi, L Li, R Wang, S Zhang… - Genome biology, 2019 - Springer
Background The sharp increase of plant genome and transcriptome data provide valuable
resources to investigate evolutionary consequences of gene duplication in a range of taxa …

Anthoceros genomes illuminate the origin of land plants and the unique biology of hornworts

FW Li, T Nishiyama, M Waller, E Frangedakis, J Keller… - Nature plants, 2020 - nature.com
Hornworts comprise a bryophyte lineage that diverged from other extant land plants> 400
million years ago and bears unique biological features, including a distinct sporophyte …