Network neuroscience
DS Bassett, O Sporns - Nature neuroscience, 2017 - nature.com
Despite substantial recent progress, our understanding of the principles and mechanisms
underlying complex brain function and cognition remains incomplete. Network neuroscience …
underlying complex brain function and cognition remains incomplete. Network neuroscience …
Computational systems biology
H Kitano - Nature, 2002 - nature.com
To understand complex biological systems requires the integration of experimental and
computational research—in other words a systems biology approach. Computational …
computational research—in other words a systems biology approach. Computational …
Twenty years of ModelDB and beyond: building essential modeling tools for the future of neuroscience
Neuron modeling may be said to have originated with the Hodgkin and Huxley action
potential model in 1952 and Rall's models of integrative activity of dendrites in 1964. Over …
potential model in 1952 and Rall's models of integrative activity of dendrites in 1964. Over …
Vision, challenges and opportunities for a Plant Cell Atlas
With growing populations and pressing environmental problems, future economies will be
increasingly plant-based. Now is the time to reimagine plant science as a critical component …
increasingly plant-based. Now is the time to reimagine plant science as a critical component …
Fast, efficient, and accurate neuro-imaging denoising via supervised deep learning
Volumetric functional imaging is widely used for recording neuron activities in vivo, but there
exist tradeoffs between the quality of the extracted calcium traces, imaging speed, and laser …
exist tradeoffs between the quality of the extracted calcium traces, imaging speed, and laser …
OpenWorm: overview and recent advances in integrative biological simulation of Caenorhabditis elegans
The adoption of powerful software tools and computational methods from the software
industry by the scientific research community has resulted in a renewed interest in …
industry by the scientific research community has resulted in a renewed interest in …
Is realistic neuronal modeling realistic?
M Almog, A Korngreen - Journal of neurophysiology, 2016 - journals.physiology.org
Scientific models are abstractions that aim to explain natural phenomena. A successful
model shows how a complex phenomenon arises from relatively simple principles while …
model shows how a complex phenomenon arises from relatively simple principles while …
The self-assembling brain: how neural networks grow smarter
PR Hiesinger - 2021 - torrossa.com
There are easier things to make than a brain. Driven by the promise and resources of
biomedical research, developmental neurobiologists are trying to understand how it is done …
biomedical research, developmental neurobiologists are trying to understand how it is done …
[HTML][HTML] Open source brain: a collaborative resource for visualizing, analyzing, simulating, and developing standardized models of neurons and circuits
P Gleeson, M Cantarelli, B Marin, A Quintana… - Neuron, 2019 - cell.com
Computational models are powerful tools for exploring the properties of complex biological
systems. In neuroscience, data-driven models of neural circuits that span multiple scales are …
systems. In neuroscience, data-driven models of neural circuits that span multiple scales are …
Tracking calcium dynamics from individual neurons in behaving animals
Measuring the activity of neuronal populations with calcium imaging can capture emergent
functional properties of neuronal circuits with single cell resolution. However, the motion of …
functional properties of neuronal circuits with single cell resolution. However, the motion of …