B cells, plasma cells and antibody repertoires in the tumour microenvironment
GV Sharonov, EO Serebrovskaya… - Nature Reviews …, 2020 - nature.com
Recent data show that B cells and plasma cells located in tumours or in tumour-draining
lymph nodes can have important roles in shaping antitumour immune responses. In tumour …
lymph nodes can have important roles in shaping antitumour immune responses. In tumour …
The molecular mechanisms that underlie the immune biology of anti-drug antibody formation following treatment with monoclonal antibodies
A Vaisman-Mentesh, M Gutierrez-Gonzalez… - Frontiers in …, 2020 - frontiersin.org
Monoclonal antibodies (mAbs) are a crucial asset for human health and modern medicine,
however, the repeated administration of mAbs can be highly immunogenic. Drug …
however, the repeated administration of mAbs can be highly immunogenic. Drug …
Fast, accurate antibody structure prediction from deep learning on massive set of natural antibodies
Antibodies have the capacity to bind a diverse set of antigens, and they have become critical
therapeutics and diagnostic molecules. The binding of antibodies is facilitated by a set of six …
therapeutics and diagnostic molecules. The binding of antibodies is facilitated by a set of six …
Antibody design using LSTM based deep generative model from phage display library for affinity maturation
K Saka, T Kakuzaki, S Metsugi, D Kashiwagi… - Scientific reports, 2021 - nature.com
Molecular evolution is an important step in the development of therapeutic antibodies.
However, the current method of affinity maturation is overly costly and labor-intensive …
However, the current method of affinity maturation is overly costly and labor-intensive …
Fast, accurate antibody structure prediction from deep learning on massive set of natural antibodies
JA Ruffolo, JJ Gray - Biophysical Journal, 2022 - cell.com
1Program in Molecular Biophysics, Johns Hopkins University, Baltimore, MD, USA,
2Department of Chemical and Biomolecular Engineering, Johns Hopkins University …
2Department of Chemical and Biomolecular Engineering, Johns Hopkins University …
Deciphering antibody affinity maturation with language models and weakly supervised learning
In response to pathogens, the adaptive immune system generates specific antibodies that
bind and neutralize foreign antigens. Understanding the composition of an individual's …
bind and neutralize foreign antigens. Understanding the composition of an individual's …
Fusion protein linkers: property, design and functionality
As an indispensable component of recombinant fusion proteins, linkers have shown
increasing importance in the construction of stable, bioactive fusion proteins. This review …
increasing importance in the construction of stable, bioactive fusion proteins. This review …
Machine learning for biologics: opportunities for protein engineering, developability, and formulation
Successful biologics must satisfy multiple properties including activity and particular
physicochemical features that are globally defined as developability. These multiple …
physicochemical features that are globally defined as developability. These multiple …
Antigen receptor repertoire profiling from RNA-seq data
To the Editor: Somatic recombination and accumulation of mutations in VDJ segments result
in vast heterogeneity of T-cell receptor (TCR) and immunoglobulin repertoires1, 2. High …
in vast heterogeneity of T-cell receptor (TCR) and immunoglobulin repertoires1, 2. High …
The state-of-play and future of antibody therapeutics
Z Elgundi, M Reslan, E Cruz, V Sifniotis… - Advanced drug delivery …, 2017 - Elsevier
It has been over four decades since the development of monoclonal antibodies (mAbs)
using a hybridoma cell line was first reported. Since then more than thirty therapeutic …
using a hybridoma cell line was first reported. Since then more than thirty therapeutic …