[HTML][HTML] Synthetic metabolism for biohalogenation

A Cros, G Alfaro-Espinoza, A De Maria, NT Wirth… - Current opinion in …, 2022 - Elsevier
Highlights•Halogenation is a powerful strategy to tune physicochemical features of organic
molecules.•Synthetic metabolism can be tailored for the incorporation of halogen …

The anaerobic fungi: challenges and opportunities for industrial lignocellulosic biofuel production

LMG Saye, TA Navaratna, JPJ Chong, MA O'Malley… - Microorganisms, 2021 - mdpi.com
Lignocellulose is a promising feedstock for biofuel production as a renewable, carbohydrate-
rich and globally abundant source of biomass. However, challenges faced include …

Innovative tools and strategies for optimizing yeast cell factories

G Guirimand, N Kulagina, N Papon, T Hasunuma… - Trends in …, 2021 - cell.com
Metabolic engineering (ME) aims to develop efficient microbial cell factories that can
produce a wide variety of valuable compounds, ideally at the highest yield and from various …

Co‑cultivation of the anaerobic fungus Caecomyces churrovis with Methanobacterium bryantii enhances transcription of carbohydrate binding modules, dockerins …

JL Brown, CL Swift, SJ Mondo, S Seppala… - Biotechnology for …, 2021 - Springer
Anaerobic fungi and methanogenic archaea are two classes of microorganisms found in the
rumen microbiome that metabolically interact during lignocellulose breakdown. Here, stable …

Enzyme discovery in anaerobic fungi (Neocallimastigomycetes) enables lignocellulosic biorefinery innovation

TS Lankiewicz, SP Lillington… - … and Molecular Biology …, 2022 - Am Soc Microbiol
Lignocellulosic biorefineries require innovative solutions to realize their full potential, and
the discovery of novel lignocellulose-active enzymes could improve biorefinery …

A SWEET surprise: Anaerobic fungal sugar transporters and chimeras enhance sugar uptake in yeast

IA Podolsky, S Seppälä, H Xu, YS Jin… - Metabolic Engineering, 2021 - Elsevier
In the yeast Saccharomyces cerevisiae, microbial fuels and chemicals production on
lignocellulosic hydrolysates is constrained by poor sugar transport. For biotechnological …

A Genetic Engineering Toolbox for the Lignocellulolytic Anaerobic Gut Fungus Neocallimastix frontalis

CA Hooker, R Hanafy, ET Hillman… - ACS Synthetic …, 2023 - ACS Publications
Anaerobic fungi are powerful platforms for biotechnology that remain unexploited due to a
lack of genetic tools. These gut fungi encode the largest number of lignocellulolytic …

Engineered fluoride sensitivity enables biocontainment and selection of genetically-modified yeasts

JI Yoo, S Seppälä, MA OʼMalley - Nature Communications, 2020 - nature.com
Biocontainment systems are needed to neutralize genetically modified organisms (GMOs)
that pose ecological threats outside of controlled environments. In contrast, benign selection …

Genomic and proteomic biases inform metabolic engineering strategies for anaerobic fungi

S Seppälä, TS Lankiewicz, M Saxena… - Metabolic engineering …, 2020 - Elsevier
Anaerobic fungi (Neocallimastigomycota) are emerging non-model hosts for biotechnology
due to their wealth of biomass-degrading enzymes, yet tools to engineer these fungi have …

Identification and expression of small multidrug resistance transporters in early‐branching anaerobic fungi

S Seppälä, T Gierke, EE Schauer, JL Brown… - Protein …, 2023 - Wiley Online Library
Membrane‐embedded transporters impart essential functions to cells as they mediate
sensing and the uptake and extrusion of nutrients, waste products, and effector molecules …