Plant organellar genomes: much done, much more to do

J Wang, S Kan, X Liao, J Zhou, LR Tembrock… - Trends in plant …, 2024 - cell.com
Plastids and mitochondria are the only organelles that possess genomes of endosymbiotic
origin. In recent decades, advances in sequencing technologies have contributed to a …

Inheritance through the cytoplasm

MF Camus, B Alexander-Lawrie, J Sharbrough… - Heredity, 2022 - nature.com
Most heritable information in eukaryotic cells is encoded in the nuclear genome, with
inheritance patterns following classic Mendelian segregation. Genomes residing in the …

Master graph: an essential integrated assembly model for the plant mitogenome based on a graph-based framework

W He, K Xiang, C Chen, J Wang… - Briefings in …, 2023 - academic.oup.com
Unlike the typical single circular structure of most animal mitochondrial genomes
(mitogenome), the drastic structural variation of plant mitogenomes is a result of a mixture of …

Deciphering the Multi-Chromosomal Mitochondrial Genome of Populus simonii

C Bi, Y Qu, J Hou, K Wu, N Ye, T Yin - Frontiers in Plant Science, 2022 - frontiersin.org
Mitochondria, inherited maternally, are energy metabolism organelles that generate most of
the chemical energy needed to power cellular various biochemical reactions. Deciphering …

Characterisation of the complete mitochondrial genome of Taraxacum mongolicum revealed five repeat-mediated recombinations

M Jiang, Y Ni, J Li, C Liu - Plant Cell Reports, 2023 - Springer
Key message We reported the mitochondrial genome of Taraxacum mongolicum for the first
time. Five pairs of repeats that can mediate recombination were validated, leading to …

Capturing single‐copy nuclear genes, organellar genomes, and nuclear ribosomal DNA from deep genome skimming data for plant phylogenetics: A case study in …

BB Liu, ZY Ma, C Ren, RGJ Hodel… - … of Systematics and …, 2021 - Wiley Online Library
With the decreasing cost and availability of many newly developed bioinformatics pipelines,
next‐generation sequencing (NGS) has revolutionized plant systematics in recent years …

PMAT: an efficient plant mitogenome assembly toolkit using low-coverage HiFi sequencing data

C Bi, F Shen, F Han, Y Qu, J Hou, K Xu, L Xu… - Horticulture …, 2024 - academic.oup.com
Complete mitochondrial genomes (mitogenomes) of plants are valuable resources for
nucleocytoplasmic interactions, plant evolution, and plant cytoplasmic male sterile line …

Multichromosomal Mitochondrial Genome of Paphiopedilum micranthum: Compact and Fragmented Genome, and Rampant Intracellular Gene Transfer

JX Yang, N Dierckxsens, MZ Bai, YY Guo - International Journal of …, 2023 - mdpi.com
Orchidaceae is one of the largest families of angiosperms. Considering the large number of
species in this family and its symbiotic relationship with fungi, Orchidaceae provide an ideal …

Variation in mitogenome structural conformation in wild and cultivated lineages of sorghum corresponds with domestication history and plastome evolution

S Zhang, J Wang, W He, S Kan, X Liao, DR Jordan… - BMC Plant …, 2023 - Springer
Background Mitochondria are organelles within eukaryotic cells that are central to the
metabolic processes of cellular respiration and ATP production. However, the evolution of …

Assembly and comparative analysis of the complete mitochondrial genome of Ilex metabaptista (Aquifoliaceae), a Chinese endemic species with a narrow distribution

P Zhou, Q Zhang, F Li, J Huang, M Zhang - BMC Plant Biology, 2023 - Springer
Background Ilex metabaptista is a woody tree species with strong waterlogging tolerance
and is also admired as a landscape plant with high development prospects and scientific …