Near-optimal quantum algorithms for bounded edit distance and lempel-ziv factorization
Measuring sequence similarity and compressing texts are among the most fundamental
tasks in string algorithms. In this work, we develop near-optimal quantum algorithms for the …
tasks in string algorithms. In this work, we develop near-optimal quantum algorithms for the …
Approximating edit distance in the fully dynamic model
T Kociumaka, A Mukherjee… - 2023 IEEE 64th Annual …, 2023 - ieeexplore.ieee.org
The edit distance is a fundamental measure of sequence similarity, defined as the minimum
number of character insertions, deletions, and substitutions needed to transform one string …
number of character insertions, deletions, and substitutions needed to transform one string …
Optimal algorithms for bounded weighted edit distance
A Cassis, T Kociumaka… - 2023 IEEE 64th Annual …, 2023 - ieeexplore.ieee.org
The edit distance (also known as Levenshtein distance) of two strings is the minimum
number of insertions, deletions, and substitutions of characters needed to transform one …
number of insertions, deletions, and substitutions of characters needed to transform one …
Gap edit distance via non-adaptive queries: Simple and optimal
E Goldenberg, T Kociumaka… - 2022 IEEE 63rd …, 2022 - ieeexplore.ieee.org
We study the problem of approximating edit distance in sublinear time. This is formalized as
the (k,\k^c)-GAP EDIT DISTANCE problem, where the input is a pair of strings X,Y and …
the (k,\k^c)-GAP EDIT DISTANCE problem, where the input is a pair of strings X,Y and …
On Differentially Private String Distances
Given a database of bit strings $ A_1,\ldots, A_m\in\{0, 1\}^ n $, a fundamental data structure
task is to estimate the distances between a given query $ B\in\{0, 1\}^ n $ with all the strings …
task is to estimate the distances between a given query $ B\in\{0, 1\}^ n $ with all the strings …
Bounded Edit Distance: Optimal Static and Dynamic Algorithms for Small Integer Weights
E Gorbachev, T Kociumaka - arXiv preprint arXiv:2404.06401, 2024 - arxiv.org
The edit distance of two strings is the minimum number of insertions, deletions, and
substitutions needed to transform one string into the other. The textbook algorithm …
substitutions needed to transform one string into the other. The textbook algorithm …
Algorithms for sparse convolution and sublinear edit distance
N Fischer - 2023 - publikationen.sulb.uni-saarland.de
In this PhD thesis on fine-grained algorithm design and complexity, we investigate output-
sensitive and sublinear-time algorithms for two important problems.(1) Sparse Convolution …
sensitive and sublinear-time algorithms for two important problems.(1) Sparse Convolution …
An algorithmic bridge between Hamming and Levenshtein distances
The edit distance between strings classically assigns unit cost to every character insertion,
deletion, and substitution, whereas the Hamming distance only allows substitutions. In many …
deletion, and substitution, whereas the Hamming distance only allows substitutions. In many …
Faster Sublinear-Time Edit Distance
We study the fundamental problem of approximating the edit distance of two strings. After an
extensive line of research led to the development of a constant-factor approximation …
extensive line of research led to the development of a constant-factor approximation …