Multi-omic data integration and analysis using systems genomics approaches: methods and applications in animal production, health and welfare
P Suravajhala, LJA Kogelman… - Genetics Selection …, 2016 - Springer
In the past years, there has been a remarkable development of high-throughput omics (HTO)
technologies such as genomics, epigenomics, transcriptomics, proteomics and …
technologies such as genomics, epigenomics, transcriptomics, proteomics and …
Applied animal genomics: results from the field
AL Van Eenennaam, KA Weigel… - Annu. Rev. Anim …, 2014 - annualreviews.org
Genomic selection (GS) is the use of statistical methods to estimate the genetic merit of a
genotyped animal based on prediction equations derived from large ancestral populations …
genotyped animal based on prediction equations derived from large ancestral populations …
Genomic selection: a paradigm shift in animal breeding
T Meuwissen, B Hayes, M Goddard - Animal frontiers, 2016 - academic.oup.com
Traditional marker-assisted selection (MAS) did not result in a widespread use of DNA
information in animal breeding. The main reason was that the traits of interest in livestock …
information in animal breeding. The main reason was that the traits of interest in livestock …
[HTML][HTML] Genomic selection for producer-recorded health event data in US dairy cattle
Emphasizing increased profit through increased dairy cow production has revealed a
negative relationship of production with fitness and health traits. Decreased cow health can …
negative relationship of production with fitness and health traits. Decreased cow health can …
[HTML][HTML] Symposium review: Single-step genomic evaluations in dairy cattle
During the last decade, genomic selection has revolutionized dairy cattle breeding. For
example, Nordic dairy cows (Denmark, Finland, and Sweden) born in 2018 were> 90% sired …
example, Nordic dairy cows (Denmark, Finland, and Sweden) born in 2018 were> 90% sired …
Go with the flow—biology and genetics of the lactation cycle
EM Strucken, YCSM Laurenson… - Frontiers in genetics, 2015 - frontiersin.org
Lactation is a dynamic process, which evolved to meet dietary demands of growing
offspring. At the same time, the mother's metabolism changes to meet the high requirements …
offspring. At the same time, the mother's metabolism changes to meet the high requirements …
[HTML][HTML] A single-step genomic model with direct estimation of marker effects
Z Liu, ME Goddard, F Reinhardt, R Reents - Journal of Dairy Science, 2014 - Elsevier
Compared with the currently widely used multi-step genomic models for genomic evaluation,
single-step genomic models can provide more accurate genomic evaluation by jointly …
single-step genomic models can provide more accurate genomic evaluation by jointly …
[HTML][HTML] Invited review: Advances and applications of random regression models: From quantitative genetics to genomics
An important goal in animal breeding is to improve longitudinal traits; that is, traits recorded
multiple times during an individual's lifetime or physiological cycle. Longitudinal traits were …
multiple times during an individual's lifetime or physiological cycle. Longitudinal traits were …
[HTML][HTML] Methods for genomic evaluation of a relatively small genotyped dairy population and effect of genotyped cow information in multiparity analyses
Methods for genomic prediction were evaluated for an Israeli Holstein dairy population of
713,686 cows and 1,305 progeny-tested bulls with genotypes. Inclusion of genotypes of 343 …
713,686 cows and 1,305 progeny-tested bulls with genotypes. Inclusion of genotypes of 343 …
[HTML][HTML] Single-step genomic evaluation using multitrait random regression model and test-day data
M Koivula, I Strandén, J Pösö, GP Aamand… - Journal of Dairy …, 2015 - Elsevier
The objectives of this study were to evaluate the feasibility of use of the test-day (TD) single-
step genomic BLUP (ssGBLUP) using phenotypic records of Nordic Red Dairy cows. The …
step genomic BLUP (ssGBLUP) using phenotypic records of Nordic Red Dairy cows. The …