[HTML][HTML] Transcriptional regulation and its misregulation in disease

TI Lee, RA Young - Cell, 2013 - cell.com
The gene expression programs that establish and maintain specific cell states in humans
are controlled by thousands of transcription factors, cofactors, and chromatin regulators …

The never-ending story: from pluripotency to plant developmental plasticity

C Gaillochet, JU Lohmann - Development, 2015 - journals.biologists.com
Plants are sessile organisms, some of which can live for over a thousand years. Unlike most
animals, plants employ a post-embryonic mode of development driven by the continuous …

A ubiquitous disordered protein interaction module orchestrates transcription elongation

K Cermakova, J Demeulemeester, V Lux, M Nedomova… - Science, 2021 - science.org
During eukaryotic transcription elongation, RNA polymerase II (RNAP2) is regulated by a
chorus of factors. Here, we identified a common binary interaction module consisting of TFIIS …

Metabolic control of primed human pluripotent stem cell fate and function by the miR-200c–SIRT2 axis

Y Cha, MJ Han, HJ Cha, J Zoldan, A Burkart… - Nature cell …, 2017 - nature.com
A hallmark of cancer cells is the metabolic switch from oxidative phosphorylation (OXPHOS)
to glycolysis, a phenomenon referred to as the 'Warburg effect', which is also observed in …

USP47-mediated deubiquitination and stabilization of TCEA3 attenuates pyroptosis and apoptosis of colorectal cancer cells induced by chemotherapeutic doxorubicin

X Hou, J Xia, Y Feng, L Cui, Y Yang, P Yang… - Frontiers in …, 2021 - frontiersin.org
The ubiquitin–proteasome system regulates a variety of cellular processes including growth,
differentiation and apoptosis. While E1, E2, and E3 are responsible for the conjugation of …

LEFTY2 alleviates hepatic stellate cell activation and liver fibrosis by regulating the TGF-β1/Smad3 pathway

Y Yang, F Bu, Y Yang, H Li, C Huang, X Meng… - Molecular …, 2020 - Elsevier
Activated hepatic stellate cells (HSCs) are the major cell type involved in the deposition of
extracellular matrix (ECM) during the development of hepatic fibrosis. In this study, we …

Single-cell analyses of ESCs reveal alternative pluripotent cell states and molecular mechanisms that control self-renewal

D Papatsenko, H Darr, IV Kulakovskiy, A Waghray… - Stem cell reports, 2015 - cell.com
Analyses of gene expression in single mouse embryonic stem cells (mESCs) cultured in
serum and LIF revealed the presence of two distinct cell subpopulations with individual gene …

Regulation of hypoxia responses by flavin adenine dinucleotide‐dependent modulation of HIF‐1α protein stability

SJ Yang, YS Park, JH Cho, B Moon, HJ An… - The EMBO …, 2017 - embopress.org
Oxygen deprivation induces a range of cellular adaptive responses that enable to drive
cancer progression. Here, we report that lysine‐specific demethylase 1 (LSD 1) upregulates …

Identification and validation of new cancer stem cell-related genes and their regulatory microRNAs in colorectal cancerogenesis

K Urh, M Žlajpah, N Zidar, E Boštjančič - Biomedicines, 2021 - mdpi.com
Significant progress has been made in the last decade in our understanding of the
pathogenetic mechanisms of colorectal cancer (CRC). Cancer stem cells (CSC) have …

TFIIS-dependent non-coding transcription regulates developmental genome rearrangements

K Maliszewska-Olejniczak, J Gruchota… - PLoS …, 2015 - journals.plos.org
Because of their nuclear dimorphism, ciliates provide a unique opportunity to study the role
of non-coding RNAs (ncRNAs) in the communication between germline and somatic …